RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CCDC121Q6ZUS5 278 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 SERPINA12Q8IW75 414 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 LYG1Q8N1E2 194 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 PQLC1Q8N2U9 271 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 PARP16Q8N5Y8 322 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 OR5AK2Q8NH90 309 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 WIPF2Q8TF74 440 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 CORO2AQ92828 525 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 COQ2Q96H96 371 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 OR5M11Q96RB7 305 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 CITED2Q99967 270 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 SLC25A33Q9BSK2 321 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF286AQ9HBT8 521 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 PCDHB16Q9NRJ7 776 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 TMEM140Q9NV12 185 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 MYRFQ9Y2G1 1151 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 AMMECR1Q9Y4X0 333 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 A0A087X0M5 115 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 A0A1B0GX30 115 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 FAM172BPA6NC97 362 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 HSPB6O14558 160 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 DEGS1O15121 323 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 PIN1P1O15428 100 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 MAGEB3O15480 346 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 OR2F2O95006 317 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 IGLV1-47P01700 117 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 CD2P06729 351 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 GABRB1P18505 474 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 RAB3AP20336 220 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 MNDAP41218 407 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 PRRX1P54821 245 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 RBM39Q14498 530 aaKnown RBP6.45□□□□□ -1.38
TRAF3-205ENST00000558700 IL13RA2Q14627 380 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 KISS1Q15726 138 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 PAN3Q58A45 887 aaKnown RBP6.45□□□□□ -1.38
TRAF3-205ENST00000558700 HIST2H2BDQ6DRA6 164 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 LHFPL3Q86UP9 236 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 WFDC3Q8IUB2 231 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 STPG3Q8N7X2 389 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 PXT1Q8NFP0 134 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 TNFAIP8L1Q8WVP5 186 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 TOMM40LQ969M1 308 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 GPER1Q99527 375 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 PDCD1LG2Q9BQ51 273 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 FAM192AQ9GZU8 254 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 MMP28Q9H239 520 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 PPIL3Q9H2H8 161 aaKnown RBP6.45□□□□□ -1.38
TRAF3-205ENST00000558700 ISG20L2Q9H9L3 353 aaKnown RBP6.45□□□□□ -1.38
TRAF3-205ENST00000558700 ING3Q9NXR8 418 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 CALYQ9NYX4 217 aa6.45□□□□□ -1.38
TRAF3-205ENST00000558700 RPL36Q9Y3U8 105 aaKnown RBP6.45□□□□□ -1.38
TRAF3-205ENST00000558700 KIAA2026Q5HYC2 2103 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 KBTBD11-OT1A0A1B0GTJ5 212 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 A0A1W2PRX2 142 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 H0YJX3 145 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 BUB1B-PAK6H3BSN5 160 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 GABRPO00591 440 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 IL1AP01583 271 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 OR3A4PP47883 348 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 KCNJ3P48549 501 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 BLCAPP62952 87 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 PPP3R1P63098 170 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 CDK5R1Q15078 307 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 RSU1Q15404 277 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 ZSCAN26Q16670 478 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 KLHL22Q53GT1 634 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 TPTE2P1Q5T6R2 138 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 ELP2Q6IA86 826 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 Q6P435 159 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 BAIAP2L2Q6UXY1 529 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 RNF144BQ7Z419 303 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 OR5AU1Q8NGC0 362 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 OR4X2Q8NGF9 303 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 OR51T1Q8NGJ9 327 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 OR9G1Q8NH87 305 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 RHOXF1Q8NHV9 184 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 GPR148Q8TDV2 347 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 STMN2Q93045 179 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 RPEQ96AT9 228 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 RDH12Q96NR8 316 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 RBM14Q96PK6 669 aaKnown RBP6.44□□□□□ -1.38
TRAF3-205ENST00000558700 NCOR1P1Q9H4R4 102 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 AMBNQ9NP70 447 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 AASSQ9UDR5 926 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 KIF25Q9UIL4 384 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 HSPE1-MOB4S4R3N1 261 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
TRAF3-205ENST00000558700 MEIKINA0A087WXM9 373 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 LOC100130705A0A1B0GUX0 176 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 IRGMA1A4Y4 181 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 E9PI62 339 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 CLIC3O95833 236 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 CD24P25063 80 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 NFYBP25208 207 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 C21orf33P30042 268 aaPredicted RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 SOX2P48431 317 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 SLC35A2P78381 396 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 PAX5Q02548 391 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms