RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 NOVP48745 357 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 GNG3P63215 75 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 ACVR1Q04771 509 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 IL24Q13007 206 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 ZNF600Q6ZNG1 722 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 SLC36A1Q7Z2H8 476 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 APOBEC3DQ96AK3 386 aaPredicted RBP12.31□□□□□ -0.44
SPG11-210ENST00000558319 NUP205Q92621 2012 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 SMPD2O60906 423 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 CTGFP29279 349 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 CDKN2AP42771 156 aaKnown RBP12.31□□□□□ -0.44
SPG11-210ENST00000558319 RAG2P55895 527 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 LDLRAD3Q86YD5 345 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 SIRT7Q9NRC8 400 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 SPAG17Q6Q759 2223 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 RIGQ13278 110 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 IGFBP7Q16270 282 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 STPG2Q8N412 459 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 RND1Q92730 232 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 C4orf45Q96LM5 186 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 OR2J1Q9GZK6 312 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 CRHP06850 196 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 BHLHA15Q7RTS1 189 aaPredicted RBP12.31□□□□□ -0.44
SPG11-210ENST00000558319 LANCL1O43813 399 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 KLF3P57682 345 aaPredicted RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 MIXL1Q9H2W2 232 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 LMO7DNF2Z398 122 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 HRKO00198 91 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 DHRS3O75911 302 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 EML2O95834 649 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 EWSR1Q01844 656 aaKnown RBP eCLIP12.3□□□□□ -0.44
SPG11-210ENST00000558319 MRPL58Q14197 206 aaKnown RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 A0A1B0GUL6 1792 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 SMAD7O15105 426 aaKnown RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 FOXO1Q12778 655 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 CD226Q15762 336 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 Q6ZNB5 142 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 DOLPP1Q86YN1 238 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 FLRT3Q9NZU0 649 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 PIPOXQ9P0Z9 390 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 F11RQ9Y624 299 aaKnown RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 COL16A1Q07092 1604 aaPredicted RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 LDLRAD4O15165 306 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 MBPP02686 304 aaPredicted RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 BTF3P20290 206 aaKnown RBP12.3□□□□□ -0.44
SPG11-210ENST00000558319 SPRED2Q7Z698 418 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
SPG11-210ENST00000558319 DHRS7CA6NNS2 312 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 KLF7O75840 302 aaPredicted RBP12.29□□□□□ -0.44
SPG11-210ENST00000558319 OR4A8P0C604 315 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
SPG11-210ENST00000558319 F2RL2O00254 374 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 C21orf58P58505 322 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 LHX8Q68G74 356 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 FAM60AQ9NP50 221 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 NEU3Q9UQ49 428 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
SPG11-210ENST00000558319 CACNA1CQ13936 2221 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 A0A0B4J2E0 115 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 A0A1B0GX12 115 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 FABP2P12104 132 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 ACP1P24666 158 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 CD82P27701 267 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 KLRB1Q12918 225 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 FAM74A3Q4VXF1 159 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 LYZL2Q7Z4W2 148 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 SOSTQ9BQB4 213 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
SPG11-210ENST00000558319 ANKRD55Q3KP44 614 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 PRNTQ86SH4 94 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 IGHV3-72A0A0B4J1Y9 119 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 CLDN18P56856 261 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
SPG11-210ENST00000558319 RCC2Q9P258 522 aaKnown RBP12.29□□□□□ -0.44
SPG11-210ENST00000558319 IGSF23A1L1A6 192 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 SYNGR2O43760 224 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 MUC1P15941 1255 aaPredicted RBP12.28□□□□□ -0.44
SPG11-210ENST00000558319 LINC01555Q8NAE3 123 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 CBLN4Q9NTU7 201 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 OPN4Q9UHM6 478 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 CNTRLQ7Z7A1 2325 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 C1QL3Q5VWW1 255 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 GAPTQ8N292 157 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 DYNLRB2Q8TF09 96 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 BTAF1O14981 1849 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 NKX2-6A6NCS4 301 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 MMP16P51512 607 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms