RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LRRC36Q1X8D7 754 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 C17orf58Q2M2W7 97 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 MPV17LQ2QL34 196 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 PAN3Q58A45 887 aaKnown RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 OGFRL1Q5TC84 451 aaPredicted RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 RNLSQ5VYX0 342 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 XAF1Q6GPH4 301 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 CCDC144NLQ6NUI1 221 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 CCBE1Q6UXH8 406 aaPredicted RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 THNSL2Q86YJ6 484 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 C8orf59Q8N0T1 100 aaPredicted RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 OR51A2Q8NGJ7 313 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 OR9G1Q8NH87 305 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 VCXQ9H320 206 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 SERTAD4Q9NUC0 356 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 TAS2R4Q9NYW5 299 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 PSORS1C1Q9UIG5 152 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 FOXJ3Q9UPW0 622 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 HILPDAQ9Y5L2 63 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 SIRT4Q9Y6E7 314 aaPredicted RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 TET2Q6N021 2002 aaPredicted RBP8.12□□□□□ -1.11
USP3-207ENST00000558218 MEIKINA0A087WXM9 373 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 MEX3AA1L020 520 aaKnown RBP8.12□□□□□ -1.11
USP3-207ENST00000558218 LY6LH3BQJ8 138 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 M0QZK8 103 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 HTR3BO95264 441 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 GTF2F2P13984 249 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 ADMP35318 185 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 MNDAP41218 407 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 RPS11P62280 158 aaKnown RBP eCLIP8.12□□□□□ -1.11
USP3-207ENST00000558218 HLA-DRB5Q30154 266 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 DDI2Q5TDH0 399 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 OSR2Q8N2R0 312 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 NR1H4Q96RI1 486 aaPredicted RBP8.12□□□□□ -1.11
USP3-207ENST00000558218 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 DCLRE1BQ9H816 532 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 ZNF702PQ9H963 129 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 SPACA1Q9HBV2 294 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 CLEC2DQ9UHP7 191 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 ING4Q9UNL4 249 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 ST3GAL6Q9Y274 331 aa8.12□□□□□ -1.11
USP3-207ENST00000558218 AMMECR1Q9Y4X0 333 aaPredicted RBP8.12□□□□□ -1.11
USP3-207ENST00000558218 LALBAP00709 142 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 IL1AP01583 271 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 GLAP06280 429 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 FAM106CPP0CH98 169 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 PAX6P26367 422 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 ATXN7L3Q14CW9 347 aaPredicted RBP8.11□□□□□ -1.11
USP3-207ENST00000558218 Q3ZCU0 254 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 PRAMEF5Q5TYX0 476 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 RSBN1Q5VWQ0 802 aaPredicted RBP8.11□□□□□ -1.11
USP3-207ENST00000558218 STX19Q8N4C7 294 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 NANOGP1Q8N7R0 232 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 OR52M1Q8NGK5 317 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 WIPF2Q8TF74 440 aaPredicted RBP8.11□□□□□ -1.11
USP3-207ENST00000558218 CAPSLQ8WWF8 208 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 TFAP2CQ92754 450 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 KIRREL1Q96J84 757 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 PGLYRP3Q96LB9 341 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 NKX3-1Q99801 234 aaPredicted RBP8.11□□□□□ -1.11
USP3-207ENST00000558218 DPCDQ9BVM2 203 aaPredicted RBP8.11□□□□□ -1.11
USP3-207ENST00000558218 FAM192AQ9GZU8 254 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 ZNF286AQ9HBT8 521 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 RAB9BQ9NP90 201 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 FKBP14Q9NWM8 211 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 IDI2-AS1Q9NZ38 188 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 KIF25Q9UIL4 384 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 ERGIC3Q9Y282 383 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 SIGLEC9Q9Y336 463 aa8.11□□□□□ -1.11
USP3-207ENST00000558218 TRBV5-7A0A0A0MS05 114 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A10PA6NDY2 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A18PA6NE21 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A16PA6NEW6 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A20PA6NIJ5 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A7PA6NKC0 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A9PA6NNJ1 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A12PA8MX19 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A5PA8MXJ8 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A23PA8MXZ1 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 J3QR06 171 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 MYL12BO14950 172 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 ORC5O43913 435 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 PEX14O75381 377 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 CA11O75493 328 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 OR2F2O95006 317 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 CDRT1O95170 752 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 OPN1MWP04001 364 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A15PP0C7V4 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A13PP0C7W8 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A14PP0C7W9 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 FAM90A24PP0C7X0 464 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 MAPK3P27361 379 aaPredicted RBP8.1□□□□□ -1.11
USP3-207ENST00000558218 OR3A4PP47883 348 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 WNT4P56705 351 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 RBM11P57052 281 aaKnown RBP8.1□□□□□ -1.11
USP3-207ENST00000558218 BLCAPP62952 87 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 DEFA6Q01524 100 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms