RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 GZMHP20718 246 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 GLIPR1P48060 266 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ARF6P62330 175 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 UBE2NLQ5JXB2 153 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 METAP1DQ6UB28 335 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF497Q6ZNH5 498 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 C6orf201Q7Z4U5 140 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 GAPTQ8N292 157 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 TPRX1Q8N7U7 411 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 SAMD12Q8N8I0 201 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 PLPPR1Q8TBJ4 325 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ARHGAP5-AS1Q96IT6 56 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF714Q96N38 554 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 FAAP24Q9BTP7 215 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 TMPRSS13Q9BYE2 586 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 GAL3ST2Q9H3Q3 398 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 DIABLOQ9NR28 239 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 TAS2R3Q9NYW6 316 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ONECUT1Q9UBC0 465 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 COMMD3Q9UBI1 195 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 KIF25Q9UIL4 384 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 MTORP42345 2549 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 NSD1Q96L73 2696 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF729A6NN14 1252 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-204ENST00000558172 SERPINE3A8MV23 424 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 APOA1P02647 267 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 RBP4P02753 201 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF728P0DKX0 622 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 HNF1AP20823 631 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 CR1LQ2VPA4 569 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 MOGAT2Q3SYC2 334 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 TRAT1Q6PIZ9 186 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 TRAPPC6BQ86SZ2 158 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 WDFY2Q96P53 400 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 SULT4A1Q9BR01 284 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 PECRQ9BY49 303 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 GSX1Q9H4S2 264 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-204ENST00000558172 METTL8Q9H825 291 aaKnown RBP8.62□□□□□ -1.03
LRRC28-204ENST00000558172 RAB9BQ9NP90 201 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRRC28-204ENST00000558172 BATF3Q9NR55 127 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 ING3Q9NXR8 418 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 OPN4Q9UHM6 478 aa8.62□□□□□ -1.03
LRRC28-204ENST00000558172 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
LRRC28-204ENST00000558172 A0A075B6Q4 140 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 TRBV6-6A0A0A6YYG2 114 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 C17orf98A8MV24 154 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 MFNGO00587 321 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 XRCC3O43542 346 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 TOX4O94842 621 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 GSTP1P09211 210 aaKnown RBP8.61□□□□□ -1.03
LRRC28-204ENST00000558172 MMP9P14780 707 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 HIST1H1DP16402 221 aaKnown RBP8.61□□□□□ -1.03
LRRC28-204ENST00000558172 MRPS15P82914 257 aaKnown RBP8.61□□□□□ -1.03
LRRC28-204ENST00000558172 PITPNAQ00169 270 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF273Q14593 569 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 PNLIPRP3Q17RR3 467 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 CDNFQ49AH0 187 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 PLAC9Q5JTB6 97 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 C6orf183Q5T699 404 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF554Q86TJ5 538 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 UPRTQ96BW1 309 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 SLC25A38Q96DW6 304 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 CMSS1Q9BQ75 279 aaKnown RBP8.61□□□□□ -1.03
LRRC28-204ENST00000558172 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 UNKLQ9H9P5 680 aaKnown RBP8.61□□□□□ -1.03
LRRC28-204ENST00000558172 AK3Q9UIJ7 227 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 ADAM30Q9UKF2 790 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 TRAPPC2LQ9UL33 140 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 MGAT4AQ9UM21 535 aa8.61□□□□□ -1.03
LRRC28-204ENST00000558172 KBTBD11-OT1A0A1B0GTJ5 212 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 A6NHS1 94 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 ORC5O43913 435 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 NAPSAO96009 420 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CD3GP09693 182 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CGB3P0DN86 165 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CGB7P0DN87 165 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 GNB3P16520 340 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CCL3L1P16619 93 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 PRTN3P24158 256 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 TALDO1P37837 337 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 DLX6P56179 175 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 BPIFB3P59826 476 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 ERVFRD-1P60508 538 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF260Q3ZCT1 412 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 FAM120AOSQ5T036 256 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 NCR3LG1Q68D85 454 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 OR52W1Q6IF63 320 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 MOB1BQ7L9L4 216 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 TCF23Q7RTU1 214 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 VMO1Q7Z5L0 202 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 C11orf42Q8N5U0 333 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 Q8N7P7 452 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 OR10A7Q8NGE5 316 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 OR13A1Q8NGR1 328 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 OR4K15Q8NH41 348 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 NANPQ8TBE9 248 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 MRPL30Q8TCC3 161 aaKnown RBP8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CCDC107Q8WV48 283 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms