RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 COX4I2Q96KJ9 171 aa10.33□□□□□ -0.76
TPM1-209ENST00000558072 SHARPINQ9H0F6 387 aa10.33□□□□□ -0.76
TPM1-209ENST00000558072 UBE2J1Q9Y385 318 aaPredicted RBP10.33□□□□□ -0.76
TPM1-209ENST00000558072 AKAP6Q13023 2319 aa10.33□□□□□ -0.76
TPM1-209ENST00000558072 MEIKINA0A087WXM9 373 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ODAMA1E959 279 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ZNF736B4DX44 427 aaPredicted RBP10.32□□□□□ -0.76
TPM1-209ENST00000558072 DVL1O14640 695 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 SPINT2O43291 252 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ORC5O43913 435 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 FOXH1O75593 365 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 IFNA6P05013 189 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 LIPFP07098 398 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 FCGR3AP08637 254 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 IL7P13232 177 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 AMY2BP19961 511 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 GDNFP39905 211 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 OR3A3P47888 321 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 CEBPDP49716 269 aaPredicted RBP10.32□□□□□ -0.76
TPM1-209ENST00000558072 EDDM3BP56851 147 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ARPC4P59998 168 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 GNB2P62879 340 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ATXN7L3Q14CW9 347 aaPredicted RBP10.32□□□□□ -0.76
TPM1-209ENST00000558072 CR1LQ2VPA4 569 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 CHRFAM7AQ494W8 412 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 AVPI1Q5T686 147 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ZNF57Q68EA5 555 aaPredicted RBP10.32□□□□□ -0.76
TPM1-209ENST00000558072 BEST4Q8NFU0 473 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 OR10A7Q8NGE5 316 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 OR4A4PQ8NGN8 299 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ZFAND2BQ8WV99 257 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 NUDCD2Q8WVJ2 157 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 CORO2AQ92828 525 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ST6GALNAC5Q9BVH7 336 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 BPESC1Q9GZL8 116 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 GAL3ST2Q9H3Q3 398 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 Q9N2K0 584 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 MBNL3Q9NUK0 354 aaKnown RBP10.32□□□□□ -0.76
TPM1-209ENST00000558072 TAS2R3Q9NYW6 316 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ANAPC10Q9UM13 185 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 LINC00312Q9Y6C7 94 aa10.32□□□□□ -0.76
TPM1-209ENST00000558072 ARID1AO14497 2285 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 ANKRD20A5PA0PJZ0 165 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 TRDCB7Z8K6 153 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 F5H0A9 414 aaPredicted RBP10.31□□□□□ -0.76
TPM1-209ENST00000558072 AKAIN1P0CW23 69 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 RPL31P62899 125 aaKnown RBP10.31□□□□□ -0.76
TPM1-209ENST00000558072 DGCR2P98153 550 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 AESQ08117 197 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 EDDM3AQ14507 147 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 RNASE10Q5GAN6 216 aaKnown RBP10.31□□□□□ -0.76
TPM1-209ENST00000558072 STEAP3Q658P3 488 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 ZNF880Q6PDB4 577 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 FAM216BQ8N7L0 139 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 OR5AP2Q8NGF4 316 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 OR5H2Q8NGV7 314 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 MRPL30Q8TCC3 161 aaKnown RBP10.31□□□□□ -0.76
TPM1-209ENST00000558072 CYYR1Q96J86 154 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 FOXC2Q99958 501 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
TPM1-209ENST00000558072 ABCB10Q9NRK6 738 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 NECAP2Q9NVZ3 263 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 SLC23A1Q9UHI7 598 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 ANXA10Q9UJ72 324 aa10.31□□□□□ -0.76
TPM1-209ENST00000558072 ZNF729A6NN14 1252 aaPredicted RBP10.3□□□□□ -0.76
TPM1-209ENST00000558072 DISC1C4P0D8 188 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 SSX5O60225 188 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 IGHV2-5P01817 119 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 USF1P22415 310 aaPredicted RBP10.3□□□□□ -0.76
TPM1-209ENST00000558072 ECI1P42126 302 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 GLP1RP43220 463 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 WDR25Q64LD2 544 aaPredicted RBP10.3□□□□□ -0.76
TPM1-209ENST00000558072 STEAP1BQ6NZ63 245 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 OR4K15Q8NH41 348 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 C8orf46Q8TAG6 207 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 PLPPR1Q8TBJ4 325 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 H1FXQ92522 213 aaKnown RBP10.3□□□□□ -0.76
TPM1-209ENST00000558072 GALMQ96C23 342 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 KLK11Q9UBX7 282 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 KIF25Q9UIL4 384 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 SCP2D1Q9UJQ7 156 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 SPG11Q96JI7 2443 aa10.3□□□□□ -0.76
TPM1-209ENST00000558072 LOC105371242A0A075B767 164 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 A0A1W2PQ09 198 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 MEIOCA2RUB1 952 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 A8MXK9 166 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 J3QRK9 145 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 FABP7O15540 132 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 RGS11O94810 467 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 RAB3DO95716 219 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 RBP4P02753 201 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 IL2RGP31785 369 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 HLA-DRB3P79483 266 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
TPM1-209ENST00000558072 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms