RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LPCAT4Q643R3 524 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 RPL22L1Q6P5R6 122 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 Q8NFD4 153 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 OR52I1Q8NGK6 324 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 DPF1Q92782 380 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 METTL9Q9H1A3 318 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 TMEM138Q9NPI0 162 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 PSG11Q9UQ72 335 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 IRGMA1A4Y4 181 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A18PA6NE21 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A16PA6NEW6 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A20PA6NIJ5 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A9PA6NNJ1 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A12PA8MX19 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A5PA8MXJ8 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 NPIPB11E5RHQ5 1161 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 GABRPO00591 440 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF780AO75290 641 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 MPIG6BO95866 241 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 SNRNP70P08621 437 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A15PP0C7V4 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A13PP0C7W8 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A14PP0C7W9 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 FAM90A24PP0C7X0 464 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 TMEM11P17152 192 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 SOX2P48431 317 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF529Q6P280 563 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ASCL4Q6XD76 172 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 LINC00596Q86U02 117 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 DRAM1Q8N682 238 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF555Q8NEP9 628 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 OR56B4Q8NH76 319 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 RFESDQ8TAC1 157 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 MRGPRDQ8TDS7 321 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 DPCDQ9BVM2 203 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 JAM3Q9BX67 310 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 RAB9BQ9NP90 201 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ZFP57Q9NU63 452 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ZMAT5Q9UDW3 170 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ING4Q9UNL4 249 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 ST3GAL6Q9Y274 331 aa10.82□□□□□ -0.68
SNRPA1-204ENST00000558020 SERPINE3A8MV23 424 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 FGF16O43320 207 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 OR7C1O76099 320 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 GAPDHP04406 335 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 DCKP27707 260 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 MED21Q13503 144 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 GPR176Q14439 515 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 HNF4GQ14541 408 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 LTC4SQ16873 150 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 PIGYQ3MUY2 71 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 DEFB121Q5J5C9 76 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 RSBN1Q5VWQ0 802 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 FOXRED2Q8IWF2 684 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 STX19Q8N4C7 294 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 COMMD1Q8N668 190 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 SUMF2Q8NBJ7 301 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 LEAP2Q969E1 77 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 TMEM106AQ96A25 262 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF649Q9BS31 505 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 MCRIP2Q9BUT9 160 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 IFT22Q9H7X7 185 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 FGF20Q9NP95 211 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 CHCHD3Q9NX63 227 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 TAS2R4Q9NYW5 299 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 IL36GQ9NZH8 169 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 CKLFQ9UBR5 152 aa10.81□□□□□ -0.68
SNRPA1-204ENST00000558020 TMEM30CPA0ZSE6 113 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 SH2D7A6NKC9 451 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 IGHV3-7P01780 117 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 GTF2F2P13984 249 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 MYL12AP19105 171 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 BDKRB2P30411 391 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 GNG10P50151 68 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 GTF2A1P52655 376 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 MPV17LQ2QL34 196 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 NHLRC3Q5JS37 347 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 MOB3BQ86TA1 216 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 OR51A2Q8NGJ7 313 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 OR52M1Q8NGK5 317 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 OR10K1Q8NGX5 313 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
SNRPA1-204ENST00000558020 A0A1W2PPI3 338 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 NCBP2LA6PVI3 153 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 NUDT19A8MXV4 375 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 CCRL2O00421 344 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 CDRT1O95170 752 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 IGKV1D-33P01593 117 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 IGKV1-33P01594 117 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 IL3RAP26951 378 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 RBM11P57052 281 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 DCTN2Q13561 401 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 UTF1Q5T230 341 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms