RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 DPM3Q9P2X0 92 aa3.3□□□□□ -1.88
GPHN-215ENST00000557654 DHCR7Q9UBM7 475 aaKnown RBP3.3□□□□□ -1.88
GPHN-215ENST00000557654 APOBEC3BQ9UH17 382 aaKnown RBP3.3□□□□□ -1.88
GPHN-215ENST00000557654 SIGLEC7Q9Y286 467 aa3.3□□□□□ -1.88
GPHN-215ENST00000557654 ZNF443Q9Y2A4 671 aaPredicted RBP3.3□□□□□ -1.88
GPHN-215ENST00000557654 MRPS2Q9Y399 296 aaKnown RBP3.3□□□□□ -1.88
GPHN-215ENST00000557654 ZNF337Q9Y3M9 751 aa3.3□□□□□ -1.88
GPHN-215ENST00000557654 KPTNQ9Y664 436 aa3.3□□□□□ -1.88
GPHN-215ENST00000557654 KIF26AQ9ULI4 1882 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 A0A0B4J2A0 478 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TRBV2A0A0J9YWF9 115 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 LRIT2A6NDA9 550 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 METTL21EPA6NDL7 271 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TVP23AA6NH52 213 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 C11orf98E9PRG8 122 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 SLC31A2O15432 143 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 VEGFDO43915 354 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 FADS1O60427 444 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 APBB3O95704 486 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RPN2P04844 631 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 HMGN2P05204 90 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 CRHP06850 196 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 KLK3P07288 261 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 GUSBP08236 651 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 MRPL3P09001 348 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 IFI6P09912 130 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 ZNF735P0CB33 412 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 SFTPCP11686 197 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 GTF2F2P13984 249 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 HMGA1P17096 107 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 RAB5AP20339 215 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RPS4Y1P22090 263 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 NFYBP25208 207 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 LAP3P28838 519 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 CD34P28906 385 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PRSS3P35030 304 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RBP2P50120 134 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PRKXP51817 358 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TAS2R60P59551 318 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 UBE2MP61081 183 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 RPS15P62841 145 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 DEFA6Q01524 100 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TGM3Q08188 693 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 DHRS2Q13268 280 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 ARHGAP19Q14CB8 494 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PON3Q15166 354 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 Q499Y3 187 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TP53I3Q53FA7 332 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TPGS2Q68CL5 300 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 OR10K2Q6IF99 312 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 EIF5AL1Q6IS14 154 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 C22orf39Q6P5X5 142 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TMEM205Q6UW68 189 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TMCO2Q7Z6W1 182 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 LYG2Q86SG7 212 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RANBP3LQ86VV4 465 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 VRK2Q86Y07 508 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TGIF2LYQ8IUE0 185 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 SLC35F2Q8IXU6 374 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 ZFP82Q8N141 532 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 GABRG1Q8N1C3 465 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 INO80EQ8NBZ0 244 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 ZNF740Q8NDX6 193 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 OR51S1Q8NGJ8 323 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 OR6K2Q8NGY2 324 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 OR4C6Q8NH72 309 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 LYPD6BQ8NI32 183 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RNASE11Q8TAA1 199 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 WFDC5Q8TCV5 224 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 MITD1Q8WV92 249 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PPP1R1CQ8WVI7 109 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TMEM239Q8WW34 195 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 LCN9Q8WX39 176 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RGP1Q92546 391 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 CDS1Q92903 461 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RAB7BQ96AH8 199 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 EXOSC8Q96B26 276 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 DNAJA3Q96EY1 480 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 C14orf79Q96F83 325 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 C5orf30Q96GV9 206 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 C16orf74Q96GX8 76 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 ZNF514Q96K75 400 aaPredicted RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 DEFB118Q96PH6 123 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 AQP10Q96PS8 301 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 OR7D2Q96RA2 312 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PFDN5Q99471 154 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 ADAT1Q9BUB4 502 aaKnown RBP3.29□□□□□ -1.88
GPHN-215ENST00000557654 GGACTQ9BVM4 153 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 NMNAT2Q9BZQ4 307 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 NMES1Q9C002 83 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 CHST6Q9GZX3 395 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TOLLIPQ9H0E2 274 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 OR51V1Q9H2C8 321 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 RHOFQ9HBH0 211 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 TREM1Q9NP99 234 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PRSS16Q9NQE7 514 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 PARP11Q9NR21 331 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 CACFD1Q9UGQ2 172 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 SHPKQ9UHJ6 478 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms