RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SAMD13Q5VXD3 122 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 Q5XG85 94 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM225Q6GV28 225 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A48Q6ZT89 311 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 UMODL1-AS1Q8N2C9 162 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MTURNQ8N3F0 131 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF283Q8N7M2 679 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 VN1R2Q8NFZ6 395 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR4S1Q8NGB4 309 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 LYPD6BQ8NI32 183 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SLC7A13Q8TCU3 470 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GTSF1Q8WW33 167 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 BADQ92934 168 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CPNE2Q96FN4 548 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR52E6Q96RD3 313 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 P2RX4Q99571 388 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MCHR1Q99705 422 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 C1orf50Q9BV19 199 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 METTL17Q9H7H0 456 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 INPP5EQ9NRR6 644 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PTTG3PQ9NZH4 202 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 B4GALT7Q9UBV7 327 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 Q9UF83 564 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TRAPPC4Q9Y296 219 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PREX1Q8TCU6 1659 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FER1L6Q2WGJ9 1857 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MEGF6O75095 1541 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ABCC1P33527 1531 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 COL1A2P08123 1366 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MAST1Q9Y2H9 1570 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ARFGEF2Q9Y6D5 1785 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PTPRKQ15262 1439 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 HECW1Q76N89 1606 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TRAV30A0A087WSZ9 112 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 IGHV7-81A0A0B4J1V7 117 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 EXOC1LA0A1B0GW35 172 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TPST1O60507 370 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 YPEL1O60688 119 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MPC1LP0DKB6 136 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PSMB1P20618 241 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 HTR2CP28335 458 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GABRR2P28476 465 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PRDX3P30048 256 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MIPP30301 263 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MAGEA12P43365 314 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CAV2P51636 162 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 AKR1D1P51857 326 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF133P52736 654 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 AQP4P55087 323 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CLDN12P56749 244 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 YPEL3P61236 119 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 STXBP1P61764 594 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RPS28P62857 69 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GNG3P63215 75 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CXCL6P80162 114 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 HOXC5Q00444 222 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CDK6Q00534 326 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 KLRB1Q12918 225 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TIMM50Q3ZCQ8 353 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM255AQ5JRV8 349 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 XAF1Q6GPH4 301 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 IGFL2Q6UWQ7 119 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ENPP6Q6UWR7 440 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 IZUMO2Q6UXV1 221 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FOXI2Q6ZQN5 318 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CTAGE3PQ8IX95 158 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM123Q8N131 208 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 DAW1Q8N136 415 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GPD1LQ8N335 351 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR4D11Q8NGI4 311 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR10G9Q8NGN4 311 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RHOXF1Q8NHV9 184 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PTX4Q96A99 478 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FAM131CQ96AQ9 280 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CMBLQ96DG6 245 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MRAP2Q96G30 205 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 Q96MT0 163 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 YPEL2Q96QA6 119 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PHB2Q99623 299 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MGLLQ99685 303 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ARHGDIGQ99819 225 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SLC6A7Q99884 636 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM121Q9BTD3 319 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CCDC90BQ9GZT6 254 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR51J1Q9H342 316 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TUBA4BQ9H853 241 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM27Q9HBJ8 222 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TNFRSF19Q9NS68 423 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 C14orf105Q9NVL8 296 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TAS2R16Q9NYV7 291 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SIGLEC8Q9NYZ4 499 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF225Q9UK10 706 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MCTS1Q9ULC4 181 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TP53TG1Q9Y2A0 90 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CDH10Q9Y6N8 788 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 DOCK5Q9H7D0 1870 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ZFHX3Q15911 3703 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ATRNO75882 1429 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MYH7BA7E2Y1 1941 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms