RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CEBPDP49716 269 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 RAP2BP61225 183 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PAX5Q02548 391 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 COL10A1Q03692 680 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 SNTB1Q13884 538 aaKnown RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 ATXN7L3Q14CW9 347 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 IGSF11Q5DX21 431 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 LPCAT3Q6P1A2 487 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 SLC38A6Q8IZM9 456 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 BOLLQ8N9W6 283 aaKnown RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 UXS1Q8NBZ7 420 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PIK3IP1Q96FE7 263 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PHB2Q99623 299 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 CABLES2Q9BTV7 478 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 MS4A5Q9H3V2 200 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 RANBP3Q9H6Z4 567 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 DYNLRB1Q9NP97 96 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PPP1R3CQ9UQK1 317 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 COL6A6A6NMZ7 2263 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 PLCE1Q9P212 2302 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 A0A0B4J2A0 478 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 FAM172BPA6NC97 362 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 NPIPB11E5RHQ5 1161 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 SLC22A5O76082 557 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 OR2A4O95047 310 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 SFT2D2O95562 160 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 PPYP01298 95 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 OR3A1P47881 315 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 GZMKP49863 264 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 BAMBIQ13145 260 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 ABCA11PQ4W5N1 156 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 C20orf204Q6ZNR8 217 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 NLRC3Q7RTR2 1065 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 CD177Q8N6Q3 437 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 OR5T2Q8NGG2 359 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 LILRB1Q8NHL6 650 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-233ENST00000557529 FAM222BQ8WU58 562 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 TMEM230Q96A57 120 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 ZNF486Q96H40 463 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-233ENST00000557529 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 OR2A7Q96R45 310 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 FXYD6Q9H0Q3 95 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 LIME1Q9H400 295 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 DLL4Q9NR61 685 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
SHMT2-233ENST00000557529 CISD1Q9NZ45 108 aaKnown RBP10.48□□□□□ -0.73
SHMT2-233ENST00000557529 KCNIP1Q9NZI2 227 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 SLC23A1Q9UHI7 598 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 SHPKQ9UHJ6 478 aa10.48□□□□□ -0.73
SHMT2-233ENST00000557529 IGKV1D-17A0A075B6S4 117 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 TRBV6-7A0A0A0MS04 114 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 GOSR2O14653 212 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 BET1O15155 118 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 TUSC2O75896 110 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 HLA-GP17693 338 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 RCC1P18754 421 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-233ENST00000557529 PI3P19957 117 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 AADACP22760 399 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 NFYAP23511 347 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-233ENST00000557529 UQCRFS1P47985 274 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 NKX2-5P52952 324 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-233ENST00000557529 FXYD4P59646 89 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 CCL8P80075 99 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 HMGN3Q15651 99 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 SGPP2Q8IWX5 399 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 ASCC1Q8N9N2 400 aaKnown RBP10.47□□□□□ -0.73
SHMT2-233ENST00000557529 OR10J5Q8NHC4 309 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 COQ8AQ8NI60 647 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 CASTOR1Q8WTX7 329 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 ITLN2Q8WWU7 325 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-233ENST00000557529 NEUROG1Q92886 237 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 TOMM40LQ969M1 308 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 SNX22Q96L94 193 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 TMEM204Q9BSN7 226 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 TMPRSS13Q9BYE2 586 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 SAP30LQ9HAJ7 183 aa10.47□□□□□ -0.73
SHMT2-233ENST00000557529 IGKV1-6A0A0C4DH72 117 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 OOEPA6NGQ2 149 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 DEFB108AA8MXU0 73 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 MGST3O14880 152 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF737O75373 536 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 MUC1P15941 1255 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-233ENST00000557529 LOXP28300 417 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-233ENST00000557529 CD80P33681 288 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 GABRA2P47869 451 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 HERPUD1Q15011 391 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF672Q499Z4 452 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-233ENST00000557529 C6orf183Q5T699 404 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 TRAT1Q6PIZ9 186 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 C1orf87Q8N0U7 546 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 CCDC71LQ8N9Z2 235 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 OR2T35Q8NGX2 323 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 ANGPTL6Q8NI99 470 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 KIRREL1Q96J84 757 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 RSRP1Q9BUV0 290 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 CHIAQ9BZP6 476 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms