RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ATXN7O15265 892 aaPredicted RBP15.15■□□□□ 0.02
XRCC3-218ENST00000557439 RHBDL1O75783 438 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 CEBPGP53567 150 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 SNRPEP62304 92 aaKnown RBP15.15■□□□□ 0.02
XRCC3-218ENST00000557439 OR1C1Q15619 314 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 KRBOX4Q5JUW0 171 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 SHEQ5VZ18 495 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 TMEM45BQ96B21 275 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 TTTY12Q9BZ98 90 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 C11orf1Q9H5F2 150 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 SMCO4Q9NRQ5 59 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 KPTNQ9Y664 436 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 PRR14LQ5THK1 2151 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 CFAP47Q6ZTR5 3102 aa15.15■□□□□ 0.02
XRCC3-218ENST00000557439 A0A0G2JRQ6 117 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 A0A1W2PPE3 182 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 UMAD1C9J7I0 102 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 TRAPPC2LH3BP13 241 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 CEACAM21Q3KPI0 293 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 ABHD17BQ5VST6 288 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 PRR18Q8N4B5 295 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 OR5C1Q8NGR4 320 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 OR2G3Q8NGZ4 309 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 OR51H1Q8NH63 302 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 GTF3C1Q12789 2109 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 hCG_1809904A0A1W2PP81 198 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 A0A1W2PR64 198 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 A0A1W2PRV1 198 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 TMEM251Q8N6I4 163 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 GUCD1Q96NT3 240 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 FAM173AQ9BQD7 235 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 BIN3Q9NQY0 253 aa15.14■□□□□ 0.01
XRCC3-218ENST00000557439 IGKV3D-15A0A087WSY6 115 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 A0A1W2PPE2 198 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 A0A1W2PR80 420 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 K7N7A8 449 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 ACP1P24666 158 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 DYNLT3P51808 116 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 TMEM252Q8N6L7 170 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 SUMF2Q8NBJ7 301 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 IL1F10Q8WWZ1 152 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 ARRDC1-AS1Q9H2J1 176 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 LIPGQ9Y5X9 500 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 CD300LBA8K4G0 201 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 WNT5AP41221 380 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 ZNF154Q13106 437 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 OR2T2Q6IF00 324 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 PLSCR2Q9NRY7 297 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 COA4Q9NYJ1 87 aa15.13■□□□□ 0.01
XRCC3-218ENST00000557439 ZFHX4Q86UP3 3567 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 ARHGAP21Q5T5U3 1957 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 SYNGR4O95473 234 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 FBP1P09467 338 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 HOXA1P49639 335 aaPredicted RBP15.12■□□□□ 0.01
XRCC3-218ENST00000557439 HOXA4Q00056 320 aaPredicted RBP15.12■□□□□ 0.01
XRCC3-218ENST00000557439 PLGLB1Q02325 96 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 Q8NFD4 153 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 SFT2D1Q8WV19 159 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 POM121L2Q96KW2 1035 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 TMEM56Q96MV1 263 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 FAM86C1Q9NVL1 165 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 IL17BQ9UHF5 180 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 TMEM56-RWDD3S4R434 201 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 CA6P23280 308 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 ATP1A1-AS1Q5TC04 95 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 MKXQ8IYA7 352 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 PLPPR1Q8TBJ4 325 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 MRPL30Q8TCC3 161 aaKnown RBP15.12■□□□□ 0.01
XRCC3-218ENST00000557439 APOBEC3DQ96AK3 386 aaPredicted RBP15.12■□□□□ 0.01
XRCC3-218ENST00000557439 APH1AQ96BI3 265 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 TECTBQ96PL2 329 aa15.12■□□□□ 0.01
XRCC3-218ENST00000557439 PUS1Q9Y606 427 aaKnown RBP eCLIP15.12■□□□□ 0.01
XRCC3-218ENST00000557439 CHST1O43916 411 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 CDS2O95674 445 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 SELEP16581 610 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 PCSK4Q6UW60 755 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 P4HA3Q7Z4N8 544 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 FAM24BQ8N5W8 94 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 OR1A1Q9P1Q5 309 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 MRPS18CQ9Y3D5 142 aaKnown RBP15.11■□□□□ 0.01
XRCC3-218ENST00000557439 TRAV24A0A0B4J272 114 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 UCP2P55851 309 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 VAMP2P63027 116 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 HAGHQ16775 308 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 NMSQ5H8A3 153 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 RBMS3Q6XE24 437 aaKnown RBP15.11■□□□□ 0.01
XRCC3-218ENST00000557439 TAAR9Q96RI9 348 aa15.11■□□□□ 0.01
XRCC3-218ENST00000557439 TNRC6AQ8NDV7 1962 aaKnown RBP15.1■□□□□ 0.01
XRCC3-218ENST00000557439 LMO1P25800 156 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 PLA2G5P39877 138 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 LINC00470Q9BZP3 86 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 TAAR3PQ9P1P4 343 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 ATP23Q9Y6H3 246 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 PGLYRP1O75594 196 aaPredicted RBP15.1■□□□□ 0.01
XRCC3-218ENST00000557439 EIF3GO75821 320 aaKnown RBP eCLIP15.1■□□□□ 0.01
XRCC3-218ENST00000557439 TUSC2O75896 110 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 HIST1H2AAQ96QV6 131 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 SPRY4Q9C004 299 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 DEFB127Q9H1M4 99 aa15.1■□□□□ 0.01
XRCC3-218ENST00000557439 KCNJ16Q9NPI9 418 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms