RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 NEK7Q8TDX7 302 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 DYRK2Q92630 601 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 MALSU1Q96EH3 234 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 CLEC7AQ9BXN2 247 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 BANF2Q9H503 90 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 TNFRSF19Q9NS68 423 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 KIF25Q9UIL4 384 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 IGHV2-26A0A0B4J1V2 119 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 KBTBD11-OT1A0A1B0GTJ5 212 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 TRDV1A0A1B0GX56 115 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 TMEM30CPA0ZSE6 113 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 TRIM64CA6NLI5 447 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 PDCD5O14737 125 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 SLC22A1O15245 554 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 BPNT1O95861 308 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 IGHV4-59P01825 116 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 GLAP06280 429 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 SMIM18P0DKX4 95 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 CDK2P24941 298 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 PSMB9P28065 219 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 GLP1RP43220 463 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 MINOS1Q5TGZ0 78 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 PRAMEF5Q5TYX0 476 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 CD200R1LQ6Q8B3 271 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 GDPGP1Q6ZNW5 385 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 KCNG3Q8TAE7 436 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 Q96M66 194 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 CHIAQ9BZP6 476 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 PLGRKTQ9HBL7 147 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 RCC2Q9P258 522 aaKnown RBP10.15□□□□□ -0.78
SLIRP-209ENST00000557342 AK6Q9Y3D8 172 aaKnown RBP10.15□□□□□ -0.78
SLIRP-209ENST00000557342 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
SLIRP-209ENST00000557342 TRAV1-2A0A0B4J238 106 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 FAM181BA6NEQ2 426 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 SLC17A2O00624 439 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 CA11O75493 328 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 MPIG6BO95866 241 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 CGB3P0DN86 165 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 CGB7P0DN87 165 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 VSIG8P0DPA2 414 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 GZMHP20718 246 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 FUT3P21217 361 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 MYL9P24844 172 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 CD34P28906 385 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 LRRC75BQ2VPJ9 315 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 RAB12Q6IQ22 244 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 ABHD12Q8N2K0 398 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 TMEM104Q8NE00 496 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 TSPAN14Q8NG11 270 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 OR10A7Q8NGE5 316 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 OR13A1Q8NGR1 328 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 ZNF596Q8TC21 504 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 FAM46BQ96A09 425 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 SSX3Q99909 188 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 TMEM59Q9BXS4 323 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
SLIRP-209ENST00000557342 CALYQ9NYX4 217 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 ZNF581Q9P0T4 197 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 VPREB3Q9UKI3 123 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 PEX16Q9Y5Y5 336 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 V9GY05 133 aa10.14□□□□□ -0.79
SLIRP-209ENST00000557342 COL6A5A8TX70 2615 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 A0A087WXM4 84 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 A0A087X0M5 115 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 A0A1B0GX30 115 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 TOR1AO14656 332 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 GPR137BO60478 399 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 PDCD6O75340 191 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 MMP23AO75900 390 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 IL1AP01583 271 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 ARSBP15848 533 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 OMGP23515 440 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 PRRX1P54821 245 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 RPS27AP62979 156 aaKnown RBP10.13□□□□□ -0.79
SLIRP-209ENST00000557342 RAB11BQ15907 218 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 AWAT1Q58HT5 328 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 ZNF497Q6ZNH5 498 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 OR2W3Q7Z3T1 314 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 NDNFQ8TB73 568 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 MRGPRDQ8TDS7 321 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 C17orf50Q8WW18 174 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 CREB3L1Q96BA8 519 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 AJUBAQ96IF1 538 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 URM1Q9BTM9 101 aaKnown RBP10.13□□□□□ -0.79
SLIRP-209ENST00000557342 TM2D1Q9BX74 207 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 RAB9BQ9NP90 201 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 ETAA1Q9NY74 926 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 IDI2-AS1Q9NZ38 188 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 SCOCQ9UIL1 159 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 STUB1Q9UNE7 303 aa10.13□□□□□ -0.79
SLIRP-209ENST00000557342 A0A1B0GUS0 222 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 TMEM14DPA8MWL7 114 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 NPIPB11E5RHQ5 1161 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 H3BUX3 64 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms