RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 INSL4Q14641 139 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 RSBN1Q5VWQ0 802 aaPredicted RBP13.31□□□□□ -0.28
VSX1-207ENST00000557285 AWAT2Q6E213 333 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 GLIPR1L1Q6UWM5 242 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 Q6ZTK2 550 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 UBALD1Q8TB05 177 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 CCDC107Q8WV48 283 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 KIRREL1Q96J84 757 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 DERL3Q96Q80 235 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 FKBP14Q9NWM8 211 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 PAK1IP1Q9NWT1 392 aaPredicted RBP13.31□□□□□ -0.28
VSX1-207ENST00000557285 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
VSX1-207ENST00000557285 VWFP04275 2813 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 LEUTXA8MZ59 168 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 GTF2F2P13984 249 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 PRRX1P54821 245 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 BDH1Q02338 343 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 GABPB1Q06547 395 aaPredicted RBP13.3□□□□□ -0.28
VSX1-207ENST00000557285 HERPUD1Q15011 391 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 HLA-DRB5Q30154 266 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 C6orf141Q5SZD1 244 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 LYG1Q8N1E2 194 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 Q8NFD4 153 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 TMED9Q9BVK6 235 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 MND1Q9BWT6 205 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 BANF2Q9H503 90 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 IDI2-AS1Q9NZ38 188 aa13.3□□□□□ -0.28
VSX1-207ENST00000557285 BUB1B-PAK6H3BSN5 160 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 PIN1P1O15428 100 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 PEX14O75381 377 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 IL1AP01583 271 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 IGLV1-47P01700 117 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 CEACAM3P40198 252 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 DYNLT3P51808 116 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 BLCAPP62952 87 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 MED22Q15528 200 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 C2orf68Q2NKX9 166 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 TMEM95Q3KNT9 176 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 TPTE2P1Q5T6R2 138 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 Q6ZS46 218 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 CAPSLQ8WWF8 208 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 MYDGFQ969H8 173 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 PRSS22Q9GZN4 317 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 MMP27Q9H306 513 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 PCDHB16Q9NRJ7 776 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
VSX1-207ENST00000557285 MEGF8Q7Z7M0 2845 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 A0A1W2PPE3 182 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 TMEM30CPA0ZSE6 113 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 ZNF780AO75290 641 aaPredicted RBP13.28□□□□□ -0.28
VSX1-207ENST00000557285 GPX5O75715 221 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 CRTAPO75718 401 aaPredicted RBP13.28□□□□□ -0.28
VSX1-207ENST00000557285 CSF1P09603 554 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 CGB3P0DN86 165 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 CGB7P0DN87 165 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 CD34P28906 385 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 BRS3P32247 399 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 VHLP40337 213 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 KCNJ3P48549 501 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 MPV17LQ2QL34 196 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 FBLN7Q53RD9 439 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 NHLRC3Q5JS37 347 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 FAM27D1Q5T7N8 215 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 LINC00596Q86U02 117 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 OR9G1Q8NH87 305 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 SELENOIQ9C0D9 397 aa13.28□□□□□ -0.28
VSX1-207ENST00000557285 H3BUI4 141 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 HSMCR30P0CW71 290 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 MAPK3P27361 379 aaPredicted RBP13.27□□□□□ -0.29
VSX1-207ENST00000557285 GPR176Q14439 515 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 ACSM3Q53FZ2 586 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 C11orf88Q6PI97 169 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 TOMM40LQ969M1 308 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 FAM46BQ96A09 425 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 RPEQ96AT9 228 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 MMP28Q9H239 520 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 SERTAD4Q9NUC0 356 aa13.27□□□□□ -0.29
VSX1-207ENST00000557285 A0A087X0M5 115 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 A0A1B0GX30 115 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 SH2D7A6NKC9 451 aaPredicted RBP13.26□□□□□ -0.29
VSX1-207ENST00000557285 FAM90A22PA8MWA6 464 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 J3QR06 171 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 AIPO00170 330 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 KCNAB3O43448 404 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 WIPF1O43516 503 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 VDAC2P45880 294 aaPredicted RBP13.26□□□□□ -0.29
VSX1-207ENST00000557285 DEFA6Q01524 100 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 SPHARQ15513 63 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 NSUN5P1Q3KNT7 163 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 RBM48Q5RL73 367 aaKnown RBP13.26□□□□□ -0.29
VSX1-207ENST00000557285 DTX3Q8N9I9 347 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 TMEM104Q8NE00 496 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 OR10X1Q8NGY0 326 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 ARL11Q969Q4 196 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 TMEM203Q969S6 136 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 CYYR1Q96J86 154 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 SLC25A33Q9BSK2 321 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms