RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 OR11H7Q8NGC8 314 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 CAPSLQ8WWF8 208 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 GTF3AQ92664 365 aaKnown RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 R3HDM4Q96D70 268 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 MUCL1Q96DR8 90 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 CMSS1Q9BQ75 279 aaKnown RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 SEC22CQ9BRL7 303 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 FAAP24Q9BTP7 215 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 RTL8AQ9BWD3 113 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 SFXN3Q9BWM7 321 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 BCL2L14Q9BZR8 327 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 PKIBQ9C010 78 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 PPA2Q9H2U2 334 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 OR51I2Q9H344 312 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 PIGMQ9H3S5 423 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 SLA2Q9H6Q3 261 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 TMEM100Q9NV29 134 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 MGAT4CQ9UBM8 478 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 ELF5Q9UKW6 265 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 MGAT4AQ9UM21 535 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 ST3GAL6Q9Y274 331 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 FLNCQ14315 2725 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 CEP192Q8TEP8 1941 aa3.78□□□□□ -1.81
SRP54-212ENST00000556992 NINQ8N4C6 2090 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 NOTCH2Q04721 2471 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 KNTC1P50748 2209 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 A0A0B4J2A0 478 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 LRP5LA4QPB2 252 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 TMEM210A6NLX4 147 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 MCRIP1C9JLW8 97 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 K7EM74 188 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 GEMIN2O14893 280 aaKnown RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 DEGS1O15121 323 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 SMPD2O60906 423 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 SLC22A5O76082 557 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR7C1O76099 320 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 DUS4LO95620 317 aaKnown RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 IGKV3-15P01624 115 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 IGLV1-44P01699 117 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CSN2P05814 226 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 SFTPBP07988 381 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR5H8P0DN80 308 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 AKR1C4P17516 323 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CA6P23280 308 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 NFYAP23511 347 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 ZBTB25P24278 435 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 DNASE1P24855 282 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CHATP28329 748 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 GCH1P30793 250 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CALCRP30988 508 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 IDH3GP51553 393 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 RBM11P57052 281 aaKnown RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 TMPRSS3P57727 454 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 ARPC4P59998 168 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 FGF12P61328 243 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CYCSP99999 105 aaKnown RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 RBPJQ06330 500 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 FGL1Q08830 312 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 PSG7Q13046 419 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 MPV17LQ2QL34 196 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 ZNF718Q3SXZ3 478 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 TMEM128Q5BJH2 165 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 TIMM23BQ5SRD1 257 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 ZNF324BQ6AW86 544 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 SIGIRRQ6IA17 410 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR2T2Q6IF00 324 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 LPCAT3Q6P1A2 487 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 HAGHLQ6PII5 290 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 Q6ZS49 121 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 LYG2Q86SG7 212 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 DOLPP1Q86YN1 238 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CALHM1Q8IU99 346 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 FAM58AQ8N1B3 248 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 ASCC1Q8N9N2 400 aaKnown RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR8G5Q8NG78 346 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR2AK2Q8NG84 335 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR10AD1Q8NGE0 317 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR1J1Q8NGS3 322 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR13C8Q8NGS7 320 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR2T35Q8NGX2 323 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR13G1Q8NGZ3 307 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 GRPEL2Q8TAA5 225 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 KLF14Q8TD94 323 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 MITD1Q8WV92 249 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 EMG1Q92979 244 aaKnown RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 PIK3IP1Q96FE7 263 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 PHB2Q99623 299 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 TMEM246Q9BRR3 403 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 C1QTNF6Q9BXI9 259 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 CHIAQ9BZP6 476 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OR2J1Q9GZK6 312 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 OPN3Q9H1Y3 402 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 ZNF442Q9H7R0 627 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 C12orf4Q9NQ89 552 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 NECAP2Q9NVZ3 263 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 MTCH1Q9NZJ7 389 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 ZNF629Q9UEG4 869 aaPredicted RBP3.77□□□□□ -1.81
SRP54-212ENST00000556992 SHPKQ9UHJ6 478 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 GLS2Q9UI32 602 aa3.77□□□□□ -1.81
SRP54-212ENST00000556992 AK3Q9UIJ7 227 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms