RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 RHOFQ9HBH0 211 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 PLGRKTQ9HBL7 147 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 CCDC59Q9P031 241 aaKnown RBP8.37□□□□□ -1.07
SHMT2-224ENST00000556737 FOXJ3Q9UPW0 622 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 TRAV8-7A0A075B6U6 113 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 TRAV1-2A0A0B4J238 106 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 hCG_1809904A0A1W2PP81 198 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 A0A1W2PPE2 198 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 A0A1W2PR64 198 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 A0A1W2PRV1 198 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 hADV38S2A0JD32 116 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 SHISA3A0PJX4 238 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 BTBD17A6NE02 478 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 SLC33A1O00400 549 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-224ENST00000556737 RGS5O15539 181 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 CHST1O43916 411 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 MMP23AO75900 390 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 TSPAN9O75954 239 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 CLPXO76031 633 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 CSN2P05814 226 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 LMO1P25800 156 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 ERP29P30040 261 aaKnown RBP8.36□□□□□ -1.07
SHMT2-224ENST00000556737 BDKRB2P30411 391 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 OR10A3P58181 314 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 HES5Q5TA89 166 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 DDI2Q5TDH0 399 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 GLT8D1Q68CQ7 371 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 JAGN1Q8N5M9 183 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 OR11H6Q8NGC7 330 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 PPP1R35Q8TAP8 253 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 SLC25A46Q96AG3 418 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 COQ2Q96H96 371 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 GPER1Q99527 375 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 TSC22D3Q99576 134 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 SSX3Q99909 188 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 PPA2Q9H2U2 334 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 DAPK2Q9UIK4 370 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 RNF114Q9Y508 228 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 VWFP04275 2813 aa8.36□□□□□ -1.07
SHMT2-224ENST00000556737 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 IGHV2-26A0A0B4J1V2 119 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 A0A0G2JK05 382 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 VGLL3A8MV65 326 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 SH2D1BO14796 132 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 FSTP19883 344 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 S100A5P33763 92 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 GDNFP39905 211 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 OR3A4PP47883 348 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 PSMD7P51665 324 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 LY6EQ16553 131 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 ELP2Q6IA86 826 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 SFXN4Q6P4A7 337 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 MZT2AQ6P582 158 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 BAIAP2L2Q6UXY1 529 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 CROCCP3Q8IVE0 287 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 Q8NFD4 153 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 PXT1Q8NFP0 134 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 OR13D1Q8NGV5 346 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 CPNE2Q96FN4 548 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-224ENST00000556737 ZNF581Q9P0T4 197 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 UBE2J1Q9Y385 318 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-224ENST00000556737 TBL2Q9Y4P3 447 aaKnown RBP8.35□□□□□ -1.07
SHMT2-224ENST00000556737 SESN1Q9Y6P5 492 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 V9GY05 133 aa8.35□□□□□ -1.07
SHMT2-224ENST00000556737 NOTOA8MTQ0 251 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 ALDOBP05062 364 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 ARG1P05089 322 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 TMEM225BP0DP42 221 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 SLC2A2P11168 524 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-224ENST00000556737 IGFBP3P17936 291 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-224ENST00000556737 GLIPR1P48060 266 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 AESQ08117 197 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 ATXN7L3Q14CW9 347 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-224ENST00000556737 RAB11BQ15907 218 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 PLA1AQ53H76 456 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 PRAMEF5Q5TYX0 476 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 BRICD5Q6PL45 260 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 ASCL4Q6XD76 172 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 LRRTM1Q86UE6 522 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 NKAIN3Q8N8D7 197 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 CHST4Q8NCG5 386 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 OR51T1Q8NGJ9 327 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 OR4P4Q8NGL7 312 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 OR10K1Q8NGX5 313 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 TNFAIP8L1Q8WVP5 186 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 CORO2AQ92828 525 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 FOXRED1Q96CU9 486 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-224ENST00000556737 BARHL1Q9BZE3 327 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 TMEM133Q9H2Q1 129 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 TMEM138Q9NPI0 162 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 COMMD3Q9UBI1 195 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 GLS2Q9UI32 602 aa8.34□□□□□ -1.07
SHMT2-224ENST00000556737 TRAV24A0A0B4J272 114 aa8.33□□□□□ -1.08
SHMT2-224ENST00000556737 ODAMA1E959 279 aa8.33□□□□□ -1.08
SHMT2-224ENST00000556737 FAM25AB3EWG3 89 aa8.33□□□□□ -1.08
SHMT2-224ENST00000556737 FAM25CB3EWG5 89 aa8.33□□□□□ -1.08
SHMT2-224ENST00000556737 FAM25GB3EWG6 89 aa8.33□□□□□ -1.08
SHMT2-224ENST00000556737 ZNF44P15621 663 aa8.33□□□□□ -1.08
SHMT2-224ENST00000556737 ZNF93P35789 620 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms