RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ABHD12Q8N2K0 398 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 MS4A15Q8N5U1 240 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 RFESDQ8TAC1 157 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 PIFOQ8TCI5 191 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 NEK7Q8TDX7 302 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 THRSPQ92748 146 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 LEAP2Q969E1 77 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 SELENOIQ9C0D9 397 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 BEX1Q9HBH7 125 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 OR6C3Q9NZP0 311 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 MMP24Q9Y5R2 645 aa8.38□□□□□ -1.07
SNX6-208ENST00000556712 KBTBD11-OT1A0A1B0GTJ5 212 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 CLPSL1A2RUU4 121 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 IL1AP01583 271 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 UCHL1P09936 223 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 CGB3P0DN86 165 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 CGB7P0DN87 165 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 CPEP16870 476 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 GNG10P50151 68 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 RPL15P61313 204 aaKnown RBP8.37□□□□□ -1.07
SNX6-208ENST00000556712 GPR50Q13585 617 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 TPBGQ13641 420 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 RBM39Q14498 530 aaKnown RBP8.37□□□□□ -1.07
SNX6-208ENST00000556712 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 OR10K2Q6IF99 312 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 CCBE1Q6UXH8 406 aaPredicted RBP8.37□□□□□ -1.07
SNX6-208ENST00000556712 ZNF367Q7RTV3 350 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 TMEM219Q86XT9 240 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 CCDC107Q8WV48 283 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 Q96M66 194 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 GFI1Q99684 422 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 MGLLQ99685 303 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 BARHL1Q9BZE3 327 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 IFT22Q9H7X7 185 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 ABCB10Q9NRK6 738 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 IDI2-AS1Q9NZ38 188 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 RCC2Q9P258 522 aaKnown RBP8.37□□□□□ -1.07
SNX6-208ENST00000556712 BLOC1S6Q9UL45 172 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 SIGLEC9Q9Y336 463 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 RRP15Q9Y3B9 282 aaKnown RBP8.37□□□□□ -1.07
SNX6-208ENST00000556712 RNF114Q9Y508 228 aa8.37□□□□□ -1.07
SNX6-208ENST00000556712 TMEM30CPA0ZSE6 113 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 VGLL3A8MV65 326 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 F2RL2O00254 374 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 MPIG6BO95866 241 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 SRMP19623 302 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 CD24P25063 80 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 HTR1DP28221 377 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 CD34P28906 385 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 KCNJ3P48549 501 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 FABP5Q01469 135 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 PAX5Q02548 391 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 GPR176Q14439 515 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 SSX1Q16384 188 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 AANATQ16613 207 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 HLA-DRB5Q30154 266 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 MINOS1Q5TGZ0 78 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 OR52W1Q6IF63 320 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 RAB12Q6IQ22 244 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
SNX6-208ENST00000556712 RTN4RL2Q86UN3 420 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 CDH26Q8IXH8 852 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 PHYHIPQ92561 330 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 MALSU1Q96EH3 234 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 UQCC2Q9BRT2 126 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 NICN1Q9BSH3 213 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 ISYNA1Q9NPH2 558 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 ACOT13Q9NPJ3 140 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 TCF19Q9Y242 345 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 MINOS1-NBL1R4GNA1 71 aa8.36□□□□□ -1.07
SNX6-208ENST00000556712 A0A087X0M5 115 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 IGHV3-43A0A0B4J1X8 118 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 A0A1B0GUS0 222 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 A0A1B0GX30 115 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 A0A1W2PPE3 182 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 UBE2QL1A1L167 161 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 POM121CA8CG34 1229 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 AIPO00170 330 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 TOR1AO14656 332 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 IGHV3-43DP0DP04 118 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 CALRP27797 417 aaKnown RBP8.35□□□□□ -1.07
SNX6-208ENST00000556712 GABRA5P31644 462 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 PROK1P58294 105 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 GABARAPL2P60520 117 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 EMX1Q04741 257 aaPredicted RBP8.35□□□□□ -1.07
SNX6-208ENST00000556712 UNC119Q13432 240 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 P2RY14Q15391 338 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 NKAPLQ5M9Q1 402 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 C1orf100Q5SVJ3 147 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 GLT8D1Q68CQ7 371 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 SIGIRRQ6IA17 410 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 SLC35E4Q6ICL7 350 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 ZNF497Q6ZNH5 498 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 ZNF565Q8N9K5 539 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms