RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 I3L4J1 428 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 CRXO43186 299 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-218ENST00000556256 SGCEO43556 437 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 TPM1P09493 284 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 EVI2BP34910 448 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 GZMMP51124 257 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 UBE2KP61086 200 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 STX3Q13277 289 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 TPBGQ13641 420 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 FAM19A3Q7Z5A8 133 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 KRTCAP2Q8N6L1 136 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 CASTOR1Q8WTX7 329 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 OR5P3Q8WZ94 311 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 HBEGFQ99075 208 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 APOL4Q9BPW4 351 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 EBPLQ9BY08 206 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 ULBP1Q9BZM6 244 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 IFT46Q9NQC8 304 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 ENPP5Q9UJA9 477 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 POMPQ9Y244 141 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 LINC00588Q9Y4M8 146 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 DYSFO75923 2080 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF407Q9C0G0 2248 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 TRBV24-1A0A075B6N3 115 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 IGHV3OR15-7A0A075B7D8 119 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 A0A1W2PRG6 482 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 SDHAF1A6NFY7 115 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 FAM25EA8MYX2 175 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 C3orf84H3BNL1 204 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 LECT2O14960 151 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 POLR3GO15318 223 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 FABP7O15540 132 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 PSIP1O75475 530 aaKnown RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 LDOC1O95751 146 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 GPR75O95800 540 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 LTAP01374 205 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 SLC35E2BP0CK96 405 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 PSKH1P11801 424 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 SPNP16150 400 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 PSMB9P28065 219 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 RHOAP61586 193 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 KRTAP13-4Q3LI77 160 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 PYCR3Q53H96 274 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 C10orf91Q5T1B1 145 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 C10orf107Q8IVU9 208 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 HS3ST5Q8IZT8 346 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 SPERTQ8NA61 448 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 FER1L6-AS1Q8NA97 138 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 OR4A5Q8NH83 315 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 PDCD6IPQ8WUM4 868 aaKnown RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 KCTD4Q8WVF5 259 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 CLDN23Q96B33 292 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 CCDC124Q96CT7 223 aaKnown RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 SERPINB11Q96P15 392 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 CATSPER2Q96P56 530 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 HIGD2AQ9BW72 106 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 ALX4Q9H161 411 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 TAS2R13Q9NYV9 303 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 RPUSD1Q9UJJ7 312 aaKnown RBP1.19□□□□□ -2.22
SCFD1-218ENST00000556256 BTRCQ9Y297 605 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 MIA3Q5JRA6 1907 aa1.19□□□□□ -2.22
SCFD1-218ENST00000556256 USP42Q9H9J4 1324 aaKnown RBP1.18□□□□□ -2.22
SCFD1-218ENST00000556256 TRAV8-2A0A0B4J237 113 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 A6NED7 52 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 K7ERQ8 282 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 YKT6O15498 198 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 FGF16O43320 207 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF73O43830 326 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-218ENST00000556256 SH2D1AO60880 128 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 GP1BAP07359 652 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF22P17026 224 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF3P17036 446 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 CRABP2P29373 138 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 PYCR1P32322 319 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 UGT2B10P36537 528 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 INPP1P49441 399 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 OR2B6P58173 313 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 OR4D1Q15615 310 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 OR10J3Q5JRS4 329 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 HES3Q5TGS1 186 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 SPNS3Q6ZMD2 512 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 TMPPEQ6ZT21 453 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 SSX7Q7RTT5 188 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 NIT1Q86X76 327 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 OR10D4PQ8NGN7 298 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 PGLYRP3Q96LB9 341 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 FAAP24Q9BTP7 215 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 TAPBPLQ9BX59 468 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 OR52A5Q9H2C5 316 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 NAGKQ9UJ70 344 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 MYO15BQ96JP2 1530 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 RAB3GAP2Q9H2M9 1393 aa1.18□□□□□ -2.22
SCFD1-218ENST00000556256 ABCB11O95342 1321 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 IGKV1-12A0A0C4DH73 117 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 GOLGA8QA0A0J9YX86 632 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 GOLGA8IPA6NC78 632 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 J3QLI3 93 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 J3QRE1 110 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 DEDDO75618 318 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 IGKV1D-12P01611 117 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms