RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MADCAM1Q13477 382 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PIGYQ3MUY2 71 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PARP16Q8N5Y8 322 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 Q8N9W7 124 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OR51A2Q8NGJ7 313 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 MRGPRDQ8TDS7 321 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DPF1Q92782 380 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RFKQ969G6 155 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RNFT2Q96EX2 444 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 C4orf36Q96KX1 117 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PRR25Q96S07 402 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ISG20L2Q9H9L3 353 aaKnown RBP11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 EXOGQ9Y2C4 368 aaKnown RBP11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 AMMECR1Q9Y4X0 333 aaPredicted RBP11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 AP4S1Q9Y587 144 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RYR2Q92736 4967 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IGHV3-72A0A0B4J1Y9 119 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IGHV1-3A0A0C4DH29 117 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 NUDT19A8MXV4 375 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 C15orf65H3BRN8 121 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 J3QLW9 94 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SULT1B1O43704 296 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 NHLRC4P0CG21 123 aaPredicted RBP11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TMEM225BP0DP42 221 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF19P17023 458 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GABRB1P18505 474 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GPR12P47775 334 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GNG10P50151 68 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HES1Q14469 280 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZSCAN26Q16670 478 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LTC4SQ16873 150 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PAN3Q58A45 887 aaKnown RBP11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF691Q5VV52 312 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ASCL4Q6XD76 172 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF565Q8N9K5 539 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PXT1Q8NFP0 134 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HAVCR2Q8TDQ0 301 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RGP1Q92546 391 aaPredicted RBP11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LGALS12Q96DT0 336 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 NR1H4Q96RI1 486 aaPredicted RBP11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ABCG5Q9H222 651 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 U3KQK5 164 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DNAH1Q9P2D7 4330 aa11.24□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DAPL1A0PJW8 107 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF736B4DX44 427 aaPredicted RBP11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GABRPO00591 440 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DBTP11182 482 aaKnown RBP11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 VHLP40337 213 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 REG1BP48304 166 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 FHL3Q13643 280 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IL13RA2Q14627 380 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 KIR2DS1Q14954 304 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OR10A7Q8NGE5 316 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OR10K1Q8NGX5 313 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HSPB9Q9BQS6 159 aa11.23□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HSD17B6O14756 317 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RAMP3O60896 148 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ALPLP05186 524 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HCKP08631 526 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 C21orf33P30042 268 aaPredicted RBP11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 CDX1P47902 265 aaPredicted RBP11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 BNIP1Q12981 228 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LPCAT4Q643R3 524 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TEX38Q6PEX7 206 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SERPINA12Q8IW75 414 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LINC00311Q8N616 119 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ACBD7Q8N6N7 88 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 MYOZ3Q8TDC0 251 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 CENPNQ96H22 339 aaPredicted RBP11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 CYYR1Q96J86 154 aa11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 AP4M1O00189 453 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC31A2O15432 143 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC35B1P78383 322 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 FOXE3Q13461 319 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DCTN2Q13561 401 aaKnown RBP11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GALEQ14376 348 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PNLIPRP3Q17RR3 467 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 FAM71E2Q8N5Q1 922 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SUMF2Q8NBJ7 301 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OR5D14Q8NGL3 314 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 BARHL1Q9BZE3 327 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms