RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ATP6V1FQ16864 119 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 SMIM21Q3B7S5 101 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 TMEM52BQ4KMG9 183 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 PPM1LQ5SGD2 360 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 LY6G6FQ5SQ64 297 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 TIMM23BQ5SRD1 257 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 C9orf64Q5T6V5 341 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 RESP18Q5W5W9 173 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 TMEM42Q69YG0 159 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR8G2PQ6IF36 304 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 ACSM5Q6NUN0 579 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 NIPAL1Q6NVV3 410 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 LPCAT3Q6P1A2 487 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 MED27Q6P2C8 311 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 CD200R1LQ6Q8B3 271 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 LANCL3Q6ZV70 420 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 THOC6Q86W42 341 aaKnown RBP2.42□□□□□ -2.02
SRP54-209ENST00000555746 TMEM25Q86YD3 366 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 ZNF584Q8IVC4 421 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 C11orf42Q8N5U0 333 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 DEFB119Q8N690 84 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR8J3Q8NGG0 315 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR52I1Q8NGK6 324 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR2Y1Q8NGV0 311 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR13D1Q8NGV5 346 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR4K15Q8NH41 348 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 OR10A6Q8NH74 314 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 CD200R1Q8TD46 325 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 SDR42E1Q8WUS8 393 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 C1orf54Q8WWF1 131 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 IL1F10Q8WWZ1 152 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 RPEQ96AT9 228 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 TESCQ96BS2 214 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 TIMD4Q96H15 378 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 PPP3R2Q96LZ3 170 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 VAT1Q99536 393 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 SLC6A7Q99884 636 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 VPS25Q9BRG1 176 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 NUDT9Q9BW91 350 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 ARL6Q9H0F7 186 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 RHOJQ9H4E5 214 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 ARMC7Q9H6L4 198 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 ZNF702PQ9H963 129 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 NMNAT1Q9HAN9 279 aaPredicted RBP2.42□□□□□ -2.02
SRP54-209ENST00000555746 TPT1P8Q9HAU6 139 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 TMEM27Q9HBJ8 222 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 NMRAL1Q9HBL8 299 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 HMG20AQ9NP66 347 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 SPRR3Q9UBC9 169 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 ZNF221Q9UK13 617 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 HHLA2Q9UM44 414 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 COPS3Q9UNS2 423 aa2.42□□□□□ -2.02
SRP54-209ENST00000555746 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
SRP54-209ENST00000555746 SCN8AQ9UQD0 1980 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 RYR1P21817 5038 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
SRP54-209ENST00000555746 TRAV8-7A0A075B6U6 113 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 TRBV9A0A0B4J1U6 114 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 KIR2DL5BA0A0G2JN68 375 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 KIR2DL5BA0A0G2JPC4 375 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 C9orf170A2RU37 121 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 LRP5LA4QPB2 252 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 OR6C6A6NF89 314 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 SLC22A20A6NK97 555 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 PPP5D1E7EU14 171 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 E9PLD3 99 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 F5H5T6 163 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 KCNK1O00180 336 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 PLPP3O14495 311 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 RP2O75695 350 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 SERF1AO75920 110 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 OR2J2O76002 312 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 SUPT7LO94864 414 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 LRATO95237 230 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 MPZL1O95297 269 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 RAB36O95755 333 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 MT-CO2P00403 227 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 LGALS2P05162 132 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 BCHEP06276 602 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 CST2P09228 141 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 HIST1H1EP10412 219 aaKnown RBP2.41□□□□□ -2.02
SRP54-209ENST00000555746 COX6B1P14854 86 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 ZNF43P17038 809 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 AKR1C4P17516 323 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 PSMA1P25786 263 aaKnown RBP2.41□□□□□ -2.02
SRP54-209ENST00000555746 HPCAL1P37235 193 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 DDOSTP39656 456 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 CEACAM6P40199 344 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 PMELP40967 661 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 TNFSF9P41273 254 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 MAGEA5P43359 124 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 GNPDA1P46926 289 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 TAS2R41P59536 307 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 UBE2MP61081 183 aaKnown RBP2.41□□□□□ -2.02
SRP54-209ENST00000555746 IL5RAQ01344 420 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 EWSR1Q01844 656 aaKnown RBP eCLIP2.41□□□□□ -2.02
SRP54-209ENST00000555746 ACVR1Q04771 509 aa2.41□□□□□ -2.02
SRP54-209ENST00000555746 SLC10A7Q0GE19 358 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms