RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	SLC30A2	Q9BRI3	323 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	CHIA	Q9BZP6	476 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	POLR2J2	Q9GZM3	115 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SLITRK2	Q9H156	845 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	POLR2J3	Q9H1A7	115 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	RERGL	Q9H628	205 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	MED20	Q9H944	212 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SAR1A	Q9NR31	198 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	ADA2	Q9NZK5	511 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	STX18	Q9P2W9	335 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	OR5V1	Q9UGF6	321 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	DIMT1	Q9UNQ2	313 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	FOXJ3	Q9UPW0	622 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SIGLEC7	Q9Y286	467 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	MRPS7	Q9Y2R9	242 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	LHFPL6	Q9Y693	200 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	PRKDC	P78527	4128 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	WNK1	Q9H4A3	2382 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	TG	P01266	2768 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	IGLV1-36	A0A0B4J1U3	117 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	CENPVL3	A0A0U1RRI6	287 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956		A0A1B0GW55	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	IQCF6	A8MYZ5	107 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	FAM220BP	B1ANY3	271 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	SRRM5	B3KS81	715 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	NME4	O00746	187 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	TSC22D2	O75157	780 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	MTRF1	O75570	445 aa	Known RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DIRAS1	O95057	198 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	MELTF	P08582	738 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L2	P0CJ85	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L3	P0CJ86	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L4	P0CJ87	422 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L5	P0CJ88	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L6	P0CJ89	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L7	P0CJ90	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	PPIAL4G	P0DN37	164 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	NCK1	P16333	377 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	RPL4	P36578	427 aa	Known RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	CFHR2	P36980	270 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	RPS27	P42677	84 aa	Known RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	OMP	P47874	163 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	RAG2	P55895	527 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	LSM6	P62312	80 aa	Known RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	GNB2	P62879	340 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	SCRN3	Q0VDG4	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	AQP6	Q13520	282 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	KRR1	Q13601	381 aa	Known RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	TRAM2	Q15035	370 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	ANKRD55	Q3KP44	614 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZNF404	Q494X3	552 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZBED5	Q49AG3	693 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	METTL21C	Q5VZV1	264 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	LRRN1	Q6UXK5	716 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZNF730	Q6ZMV8	503 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	MBOAT2	Q6ZWT7	520 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	PDZD9	Q8IXQ8	264 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	C1orf174	Q8IYL3	243 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	OR6V1	Q8N148	313 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	OR13G1	Q8NGZ3	307 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	LINC01006	Q8NI28	216 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	GPR148	Q8TDV2	347 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	GIPC3	Q8TF64	312 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DYDC1	Q8WWB3	177 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	RCN3	Q96D15	328 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	SEH1L	Q96EE3	360 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	CITED1	Q99966	193 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	UFSP2	Q9NUQ7	469 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	RDH8	Q9NYR8	311 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	TECR	Q9NZ01	308 aa	Known RBP	4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	ARMCX1	Q9P291	453 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	DUX4	Q9UBX2	424 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	IER3IP1	Q9Y5U9	82 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	NOTCH1	P46531	2555 aa		4.02	□□□□□ -1.77
PSMC6-208	ENST00000554956	VWF	P04275	2813 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	GMNC	A6NCL1	334 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956		F5H5K5	113 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956		K7EQM0	130 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	CXCR6	O00574	342 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	FSTL3	O95633	263 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZNF682	O95780	498 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	SERPINA1	P01009	418 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	IFNA14	P01570	189 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	TFF1	P04155	84 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	IFNW1	P05000	195 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	ACSM4	P0C7M7	580 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	NR2C1	P13056	603 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	TUBG1	P23258	451 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	GGT2	P36268	569 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	GUCA1A	P43080	201 aa	Predicted RBP	4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	PTGFR	P43088	359 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	FHIT	P49789	147 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	GSK3B	P49841	420 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	MS4A2	Q01362	244 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZNF92	Q03936	586 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	LIPE	Q05469	1076 aa		4.01	□□□□□ -1.77
PSMC6-208	ENST00000554956	COX10	Q12887	443 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms