RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CHIAQ9BZP6 476 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 SLITRK2Q9H156 845 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 HEXA-AS1Q9H8Q6 139 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 ANK2Q01484 3957 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 IGHV2-26A0A0B4J1V2 119 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 IGHV3-7P01780 117 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 RBP4P02753 201 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 ARG1P05089 322 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.81
SYNE2-214ENST00000554928 GADD45AP24522 165 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 SSTR5P35346 364 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 IER3P46695 156 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 RPS27AP62979 156 aaKnown RBP10.02□□□□□ -0.81
SYNE2-214ENST00000554928 GPR176Q14439 515 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 RAB11BQ15907 218 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 LTC4SQ16873 150 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 PLA1AQ53H76 456 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 ZNF626Q68DY1 528 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 RAB12Q6IQ22 244 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 LINC00596Q86U02 117 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 LDLRAD3Q86YD5 345 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 OR51D1Q8NGF3 324 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 OR6M1Q8NGM8 313 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 LEAP2Q969E1 77 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 PLGRKTQ9HBL7 147 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 ZNF286AQ9HBT8 521 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 TXNL4BQ9NX01 149 aaKnown RBP10.02□□□□□ -0.81
SYNE2-214ENST00000554928 CALYQ9NYX4 217 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 FAM96BQ9Y3D0 163 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 PEX16Q9Y5Y5 336 aa10.02□□□□□ -0.81
SYNE2-214ENST00000554928 TRAV1-2A0A0B4J238 106 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 KBTBD11-OT1A0A1B0GTJ5 212 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 FUOMA2VDF0 154 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A8PA6NJQ4 464 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 CLDN34H7C241 214 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 LDLRAD4O15165 306 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 BPNT1O95861 308 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 MT-ND4P03905 459 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 CLEC2LP0C7M8 214 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 SMIM18P0DKX4 95 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 SLC2A2P11168 524 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-214ENST00000554928 CHATP28329 748 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 TGFBR1P36897 503 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 EFNB2P52799 333 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 ACTG1P63261 375 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 PAX5Q02548 391 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 DYNC1I2Q13409 638 aaKnown RBP10.01□□□□□ -0.81
SYNE2-214ENST00000554928 MIDNQ504T8 468 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 NKAPLQ5M9Q1 402 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 SLC35E4Q6ICL7 350 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 ZNF497Q6ZNH5 498 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 Q6ZPA2 131 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 TSPAN14Q8NG11 270 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 OR11H6Q8NGC7 330 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 OR13D1Q8NGV5 346 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 OR4K15Q8NH41 348 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 NEK7Q8TDX7 302 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 ZFAND2BQ8WV99 257 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 MRPS24Q96EL2 167 aaKnown RBP10.01□□□□□ -0.81
SYNE2-214ENST00000554928 KIRREL1Q96J84 757 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 SULT4A1Q9BR01 284 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 CHCHD6Q9BRQ6 235 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM59Q9BXS4 323 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 BARHL1Q9BZE3 327 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 LPAR5Q9H1C0 372 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 ZNF696Q9H7X3 374 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 TAS2R3Q9NYW6 316 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 GHRLQ9UBU3 117 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 STUB1Q9UNE7 303 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 V9GY05 133 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 KIAA2026Q5HYC2 2103 aa10.01□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM272A0A1B0GTI8 110 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 hCG_1809904A0A1W2PP81 198 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 A0A1W2PPE2 198 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 A0A1W2PR64 198 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 A0A1W2PRV1 198 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM30CPA0ZSE6 113 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 TRIM64CA6NLI5 447 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 ZNF729A6NN14 1252 aaPredicted RBP10□□□□□ -0.81
SYNE2-214ENST00000554928 FOXI3A8MTJ6 420 aaPredicted RBP10□□□□□ -0.81
SYNE2-214ENST00000554928 NPIPB11E5RHQ5 1161 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 C15orf65H3BRN8 121 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 SOCS1O15524 211 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 PDCD6O75340 191 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 TNFAIP8O95379 198 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 IL1AP01583 271 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 FBP1P09467 338 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 UBBP0CG47 229 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 CD36P16671 472 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 NFYBP25208 207 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 FGF9P31371 208 aaPredicted RBP10□□□□□ -0.81
SYNE2-214ENST00000554928 KCNJ3P48549 501 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 RELBQ01201 579 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 C2orf76Q3KRA6 126 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 C6orf201Q7Z4U5 140 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms