RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 WDR74Q6RFH5 385 aaPredicted RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 MRGPRGQ86SM5 289 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 D2HGDHQ8N465 521 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 C5orf17Q8NAS9 161 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 PRSS27Q9BQR3 290 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 OOEPA6NGQ2 149 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
VTI1B-204ENST00000554659 KLK13Q9UKR3 277 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 A0A1W2PR80 420 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 FSTP19883 344 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 LIMS1P48059 325 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 CD81P60033 236 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 R3HDM4Q96D70 268 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 TM4SF19Q96DZ7 209 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 SMDT1Q9H4I9 107 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 H3BQ15 152 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 ZNF83P51522 516 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 DTD1Q8TEA8 209 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 RPEQ96AT9 228 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 A0A1B0GU03 582 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 CXCL2P19875 107 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 PEBP1P30086 187 aaKnown RBP12.25□□□□□ -0.45
VTI1B-204ENST00000554659 OR10J1P30954 320 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 TP53RKQ96S44 253 aa12.25□□□□□ -0.45
VTI1B-204ENST00000554659 RNF224P0DH78 156 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 KIR3DL2P43630 455 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 MRPL54Q6P161 138 aaKnown RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 LYZL2Q7Z4W2 148 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 SEBOXQ9HB31 216 aaPredicted RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 CCL28Q9NRJ3 127 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 HELTA6NFD8 242 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 H3BVH4 76 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 VSIG10L2P0DP72 767 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 LINC00596Q86U02 117 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 ADAT3Q96EY9 351 aaPredicted RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 IER2Q9BTL4 223 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 DSPPQ9NZW4 1301 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 TRGV8A0A0C4DH27 118 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 A6NDN8 102 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 C1QCP02747 245 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 KLF3P57682 345 aaPredicted RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 SRSF9Q13242 221 aaKnown RBP eCLIP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 CD200R1LQ6Q8B3 271 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 OR2H1Q9GZK4 316 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 GLRX2Q9NS18 164 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 MARF1Q9Y4F3 1742 aaKnown RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 A0A1W2PPC1 479 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 NKX2-6A6NCS4 301 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 FBLL1A6NHQ2 334 aaKnown RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 TCF21O43680 179 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 LYZP61626 148 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 EIF4E3Q8N5X7 224 aaKnown RBP12.24□□□□□ -0.45
VTI1B-204ENST00000554659 FAM74A7A6NL05 159 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 PDE6DO43924 150 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 CA11O75493 328 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 IGHV3-13P01766 116 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 IGHV3-7P01780 117 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 PMELP40967 661 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 PKIAP61925 76 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 VAX1Q5SQQ9 334 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 OR1L6Q8NGR2 347 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 OR2Y1Q8NGV0 311 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 ZPLD1Q8TCW7 415 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 ONECUT1Q9UBC0 465 aa12.24□□□□□ -0.45
VTI1B-204ENST00000554659 CENPVL1A0A0U1RR11 272 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 EML2O95834 649 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 PDPNQ86YL7 162 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 ZBTB34Q8NCN2 500 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 LILRB1Q8NHL6 650 aaPredicted RBP12.23□□□□□ -0.45
VTI1B-204ENST00000554659 KLHDC2Q9Y2U9 406 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 OR2W1Q9Y3N9 320 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 NPTNQ9Y639 398 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 PTPRZ1P23471 2315 aaPredicted RBP12.23□□□□□ -0.45
VTI1B-204ENST00000554659 HLA-DQB1P01920 261 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
VTI1B-204ENST00000554659 SRSF5Q13243 272 aaKnown RBP12.23□□□□□ -0.45
VTI1B-204ENST00000554659 ANKRD55Q3KP44 614 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 FZR1Q9UM11 496 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 TUBGCP6Q96RT7 1819 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 DNPH1O43598 174 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 MT-CO3P00414 261 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 NMBP08949 121 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 VN1R17PQ8TDU5 208 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 MRPS18BQ9Y676 258 aaKnown RBP12.23□□□□□ -0.45
VTI1B-204ENST00000554659 TRBV5-5A0A0J9YX44 114 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 PITX3O75364 302 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 LYZL6O75951 148 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms