RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SLC36A1Q7Z2H8 476 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 ANGPTL5Q86XS5 388 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 OR4D6Q8NGJ1 314 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 SMIM4Q8WVI0 70 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 C17orf50Q8WW18 174 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 BORCS8Q96FH0 119 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 GPER1Q99527 375 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 CST11Q9H112 138 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 C16orf95Q9H693 158 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 ELL3Q9HB65 397 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-215ENST00000554656 PCDHB16Q9NRJ7 776 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 GPR173Q9NS66 373 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
SHMT2-215ENST00000554656 MRPS28Q9Y2Q9 187 aaKnown RBP8.64□□□□□ -1.03
SHMT2-215ENST00000554656 PLXNB1O43157 2135 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 A6NIN4 97 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 OR5B21A6NL26 309 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 ZNF850A8MQ14 1090 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 GABARAPH6UMI1 98 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 SULT1C2O00338 296 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 AKR7A2O43488 359 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 NDUFB3O43676 98 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 ZNF780AO75290 641 aaPredicted RBP8.63□□□□□ -1.03
SHMT2-215ENST00000554656 CHRM2P08172 466 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 FBP1P09467 338 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 CDK2P24941 298 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 SAA4P35542 130 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 TAS2R20P59543 309 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 SSBP1Q04837 148 aaKnown RBP8.63□□□□□ -1.03
SHMT2-215ENST00000554656 GPR176Q14439 515 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 OXA1LQ15070 435 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 BAK1Q16611 211 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 FAM76BQ5HYJ3 339 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 TMEM69Q5SWH9 247 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 HIST2H2BDQ6DRA6 164 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 CRIP3Q6Q6R5 217 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 C1QL4Q86Z23 238 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 ZDHHC23Q8IYP9 409 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 PXT1Q8NFP0 134 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 OR5A2Q8NGI9 324 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 OR10Z1Q8NGY1 313 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 ANGPTL6Q8NI99 470 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 OR5P3Q8WZ94 311 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 H1FXQ92522 213 aaKnown RBP8.63□□□□□ -1.03
SHMT2-215ENST00000554656 FAM46BQ96A09 425 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 RFT1Q96AA3 541 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 DMRTB1Q96MA1 342 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 S100A13Q99584 98 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 MICU1Q9BPX6 476 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 C7orf50Q9BRJ6 194 aaKnown RBP8.63□□□□□ -1.03
SHMT2-215ENST00000554656 DPAGT1Q9H3H5 408 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 IL36GQ9NZH8 169 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 DSCAML1Q8TD84 2053 aa8.63□□□□□ -1.03
SHMT2-215ENST00000554656 IGKV1D-17A0A075B6S4 117 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 A0A1W2PQ09 198 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 SIGLEC5O15389 551 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 RHBDL1O75783 438 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 TSPAN9O75954 239 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 MTCP1P56278 107 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 ZP1P60852 638 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 ARL6IP1Q15041 203 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 CEACAM21Q3KPI0 293 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 LRRC10Q5BKY1 277 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 DMRTC1Q5HYR2 192 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 PLCXD3Q63HM9 321 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 DHRS7BQ6IAN0 325 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-215ENST00000554656 GLIPR1L1Q6UWM5 242 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 Q6ZNX1 250 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 MOB3CQ70IA8 216 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 POC5Q8NA72 575 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 TNFAIP8L1Q8WVP5 186 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 PIGCQ92535 297 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 TRIM63Q969Q1 353 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 MRPS24Q96EL2 167 aaKnown RBP8.62□□□□□ -1.03
SHMT2-215ENST00000554656 HIST1H2AAQ96QV6 131 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 ABHD1Q96SE0 405 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
SHMT2-215ENST00000554656 RTL8AQ9BWD3 113 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 TMEM59Q9BXS4 323 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 SCPEP1Q9HB40 452 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 ZNF222Q9UK12 451 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 FAM96BQ9Y3D0 163 aa8.62□□□□□ -1.03
SHMT2-215ENST00000554656 PQLC2LA1A4F0 135 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 NKX6-3A6NJ46 265 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 TMEM210A6NLX4 147 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 GPR37O15354 613 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 ACAA1P09110 424 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-215ENST00000554656 PAX6P26367 422 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 OR3A4PP47883 348 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 INPP1P49441 399 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 EFNB2P52799 333 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 AP3S2P59780 193 aa8.61□□□□□ -1.03
SHMT2-215ENST00000554656 RPS27AP62979 156 aaKnown RBP8.61□□□□□ -1.03
SHMT2-215ENST00000554656 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms