RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 SLC22A1O15245 554 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 AKR7A2O43488 359 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 NDUFA2O43678 99 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 RAMP3O60896 148 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 FCN3O75636 299 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 RAB3BP20337 219 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 SDC2P34741 201 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 OR3A4PP47883 348 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 UBE2E1P51965 193 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 ELP2Q6IA86 826 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 FAM90A1Q86YD7 464 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 OR4D6Q8NGJ1 314 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 TNFAIP8L1Q8WVP5 186 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 CITED4Q96RK1 184 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 GPER1Q99527 375 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 PRSS22Q9GZN4 317 aa13.54□□□□□ -0.24
NEK9-204ENST00000554258 RBM38Q9H0Z9 239 aaKnown RBP13.54□□□□□ -0.24
NEK9-204ENST00000554258 SEBOXQ9HB31 216 aaPredicted RBP13.54□□□□□ -0.24
NEK9-204ENST00000554258 TRBV23-1A0A0A0MS06 115 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 hCG_1807616A0A1W2PRN6 198 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 F8VVB4 439 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 F8VWA3 439 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 CYB5AP00167 134 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 TMEM225BP0DP42 221 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 MUC1P15941 1255 aaPredicted RBP13.53□□□□□ -0.24
NEK9-204ENST00000554258 TGFBR1P36897 503 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 NPBWR2P48146 333 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 POU3F4P49335 361 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 AANATQ16613 207 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 CLVS1Q8IUQ0 354 aaPredicted RBP13.53□□□□□ -0.24
NEK9-204ENST00000554258 Q8IYB0 196 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 JAGN1Q8N5M9 183 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 OR5D18Q8NGL1 313 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 RAB2BQ8WUD1 216 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 ZNF488Q96MN9 340 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 PRR25Q96S07 402 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 WDR13Q9H1Z4 485 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 GHRLQ9UBU3 117 aa13.53□□□□□ -0.24
NEK9-204ENST00000554258 TRAV38-1A0A0B4J264 116 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 OOEPA6NGQ2 149 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 IFITM5A6NNB3 132 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 NOTOA8MTQ0 251 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 CDRT1O95170 752 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 IL1AP01583 271 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 GYPAP02724 150 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 CLEC2LP0C7M8 214 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 BCL3P20749 454 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 RPS19P39019 145 aaKnown RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 VDAC2P45880 294 aaPredicted RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 OR10A3P58181 314 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 VBP1P61758 197 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 NCS1P62166 190 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 LSM3P62310 102 aaKnown RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 KHDC1LQ5JSQ8 128 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 ATPAF1Q5TC12 328 aaPredicted RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 ACP7Q6ZNF0 438 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 Q8N7P7 452 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 LY6G5BQ8NDX9 201 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 OR6M1Q8NGM8 313 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 DDB2Q92466 427 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 SLAMF9Q96A28 289 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 C12orf43Q96C57 262 aaKnown RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 MEGF9Q9H1U4 602 aa13.52□□□□□ -0.25
NEK9-204ENST00000554258 MRPS28Q9Y2Q9 187 aaKnown RBP13.52□□□□□ -0.25
NEK9-204ENST00000554258 AIPO00170 330 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 TMEM127O75204 238 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 ZNF780AO75290 641 aaPredicted RBP13.51□□□□□ -0.25
NEK9-204ENST00000554258 UBBP0CG47 229 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 GLRA1P23415 457 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 PAX6P26367 422 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 HTR2CP28335 458 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 RANBP1P43487 201 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 QRFPP83859 136 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 TMEM95Q3KNT9 176 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 NCR3LG1Q68D85 454 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 GLIPR1L1Q6UWM5 242 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 FGFRL1Q8N441 504 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 OR51T1Q8NGJ9 327 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 SEH1LQ96EE3 360 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 METTL9Q9H1A3 318 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 HMG20AQ9NP66 347 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 ING4Q9UNL4 249 aa13.51□□□□□ -0.25
NEK9-204ENST00000554258 HECTD4Q9Y4D8 3996 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
NEK9-204ENST00000554258 F2RL2O00254 374 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 NXPH2O95156 264 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 AMY2BP19961 511 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 GPR176Q14439 515 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 DGUOKQ16854 277 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 MICBQ29980 383 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 NHLRC3Q5JS37 347 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 STUMQ69YW2 141 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 FAM58AQ8N1B3 248 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 ANGPTL6Q8NI99 470 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 DNTTIP1Q9H147 329 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 PCDHB16Q9NRJ7 776 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 RBFOX1Q9NWB1 397 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms