RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 MADCAM1Q13477 382 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 ZNF146Q15072 292 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 C17orf58Q2M2W7 97 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 METTL21CQ5VZV1 264 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 WDR93Q6P2C0 686 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 LINC00322Q6ZN03 302 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-224ENST00000554040 COMMD2Q86X83 199 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 SLC15A3Q8IY34 581 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 OR2T10Q8NGZ9 312 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 OR51E1Q8TCB6 317 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 HAVCR2Q8TDQ0 301 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 S1PR3Q99500 378 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 TEAD3Q99594 435 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 HSPB9Q9BQS6 159 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 ELOVL1Q9BW60 279 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 PARD6BQ9BYG5 372 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 PBOV1Q9GZY1 135 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 TOLLIPQ9H0E2 274 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 ALX4Q9H161 411 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-224ENST00000554040 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATXN3-224ENST00000554040 STUB1Q9UNE7 303 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 CEPT1Q9Y6K0 416 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 LRP1BQ9NZR2 4599 aa5.22□□□□□ -1.57
ATXN3-224ENST00000554040 IGHV3-72A0A0B4J1Y9 119 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 KBTBD11-OT1A0A1B0GTJ5 212 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 TMEM269A0A1B0GVZ9 245 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 FAM230AA0A1W2PPH8 454 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 FAM90A10PA6NDY2 464 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 NUPR2A6NF83 97 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 H0Y980 276 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 INMTO95050 263 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 IFNGP01579 166 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 SOX6P35712 828 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 GLIPR1P48060 266 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 NUDT2P50583 147 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 CDC42P60953 191 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 AESQ08117 197 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 GALEQ14376 348 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 CEMP1Q6PRD7 247 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-224ENST00000554040 RASSF6Q6ZTQ3 369 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 MOB3BQ86TA1 216 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 IZUMO1Q8IYV9 350 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 OR8D4Q8NGM9 314 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 EMG1Q92979 244 aaKnown RBP5.21□□□□□ -1.58
ATXN3-224ENST00000554040 FAM162AQ96A26 154 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 SLAMF9Q96A28 289 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 LRGUKQ96M69 825 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 TSSK6Q9BXA6 273 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 CADM1Q9BY67 442 aaKnown RBP5.21□□□□□ -1.58
ATXN3-224ENST00000554040 FAM206AQ9NX38 181 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-224ENST00000554040 PSG11Q9UQ72 335 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 WSB1Q9Y6I7 421 aa5.21□□□□□ -1.58
ATXN3-224ENST00000554040 IGKV1-27A0A075B6S5 117 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 IGHV4OR15-8A0A075B7B6 117 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 A0A087WW49 117 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 IGHV1-3A0A0C4DH29 117 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 ODAMA1E959 279 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 CXorf65A6NEN9 183 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 A6NIN4 97 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 ZNF729A6NN14 1252 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 G3V318 75 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 SIRPB1O00241 398 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 MOSP00540 346 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 GASTP01350 101 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 IGHV3-7P01780 117 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 GAPDHP04406 335 aaKnown RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 CGB3P0DN86 165 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 CGB7P0DN87 165 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 NCK1P16333 377 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 ALOX5APP20292 161 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 MFGE8Q08431 387 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 ZNF816Q0VGE8 651 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 PMS2P11Q13670 270 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 SAMD4BQ5PRF9 694 aaKnown RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 LGALS9CQ6DKI2 356 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 DEGS2Q6QHC5 323 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 SLC25A26Q70HW3 274 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 GTSCR1Q86UQ5 136 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 Q8IYB0 196 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 FAM58AQ8N1B3 248 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 OR8H1Q8NGG4 311 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 OR10X1Q8NGY0 326 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 LEAP2Q969E1 77 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 FLYWCH2Q96CP2 140 aaKnown RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 TLCD1Q96CP7 247 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 THAP7Q9BT49 309 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 MED20Q9H944 212 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 RBFOX1Q9NWB1 397 aaKnown RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 TAS2R1Q9NYW7 299 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 NUFIP1Q9UHK0 495 aaKnown RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 BAIAP2Q9UQB8 552 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 MRPS28Q9Y2Q9 187 aaKnown RBP5.2□□□□□ -1.58
ATXN3-224ENST00000554040 KLHDC2Q9Y2U9 406 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 V9GYS6 101 aa5.2□□□□□ -1.58
ATXN3-224ENST00000554040 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
ATXN3-224ENST00000554040 PKD1P98161 4303 aa5.19□□□□□ -1.58
ATXN3-224ENST00000554040 TRBV2A0A0J9YWF9 115 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms