RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	ZNF850	A8MQ14	1090 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	EPM2A	B3EWF7	344 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	BUB1B-PAK6	H3BSN5	160 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	RTL8C	O15255	209 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	CIDEA	O60543	219 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	CD14	P08571	375 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	RBMY1C	P0DJD4	496 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	PPIB	P23284	216 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	IL12A	P29459	219 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	ERVK11-1	P61568	191 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	FAM3A	P98173	230 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	SCARB2	Q14108	478 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	PCLAF	Q15004	111 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	DUSP7	Q16829	419 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	GTDC1	Q4AE62	458 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	C14orf177	Q52M58	125 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	MSANTD1	Q6ZTZ1	278 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	SLC16A9	Q7RTY1	509 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	LYG2	Q86SG7	212 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	TGIF2LX	Q8IUE1	241 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	TIGD4	Q8IY51	512 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686		Q8N402	240 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	CD177	Q8N6Q3	437 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	LRRC75A	Q8NAA5	344 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	SMYD1	Q8NB12	490 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR51A7	Q8NH64	312 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	FCAMR	Q8WWV6	532 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	RPE	Q96AT9	228 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	VPS33A	Q96AX1	596 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	BPIFA2	Q96DR5	249 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	PPP1R36	Q96LQ0	422 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	KCTD7	Q96MP8	289 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	C17orf77	Q96MU5	243 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	OVOL2	Q9BRP0	275 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	SYT4	Q9H2B2	425 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	IKZF5	Q9H5V7	419 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	GNB4	Q9HAV0	340 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	MRM2	Q9UI43	246 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	RHBDD3	Q9Y3P4	386 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	N6AMT1	Q9Y5N5	214 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	DNAH2	Q9P225	4427 aa		4.36	□□□□□ -1.71
ATXN3-223	ENST00000553686	FAM183A	A6NL82	134 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	C15orf62	A8K5M9	175 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686		K7N7A8	449 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	ZSCAN12	O43309	604 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	MPZL2	O60487	215 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	HSPB1	P04792	205 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	ABHD2	P08910	425 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	GCA	P28676	217 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	AQP1	P29972	269 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	ALDH3A1	P30838	453 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	IFNA8	P32881	189 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	BMI1	P35226	326 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	GPR4	P46093	362 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	RAB9A	P51151	201 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	TAS2R41	P59536	307 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	KIAA0141	Q14154	515 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	TAF13	Q15543	124 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	MEP1B	Q16820	701 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	MEST	Q5EB52	335 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	FGD3	Q5JSP0	725 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	TRPT1	Q86TN4	253 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	ADCK1	Q86TW2	530 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	RBM45	Q8IUH3	476 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	LINC00346	Q8IVM7	164 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	NKAIN4	Q8IVV8	208 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	KIRREL3	Q8IZU9	778 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	ASCC1	Q8N9N2	400 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	SLC26A7	Q8TE54	656 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR5P3	Q8WZ94	311 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686		Q96M85	177 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	C7orf26	Q96N11	449 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	C18orf15	Q96N68	181 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	RASL11B	Q9BPW5	248 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	POLR2J2	Q9GZM3	115 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	MFF	Q9GZY8	342 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	NSRP1	Q9H0G5	558 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	POLR2J3	Q9H1A7	115 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	TMEM38A	Q9H6F2	299 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	PLEKHA3	Q9HB20	300 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	SLC2A8	Q9NY64	477 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	PTTG2	Q9NZH5	202 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	CYB5R1	Q9UHQ9	305 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	LINC00312	Q9Y6C7	94 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	COMMD3-BMI1	R4GMX3	469 aa		4.35	□□□□□ -1.71
ATXN3-223	ENST00000553686	TRAV27	A0A087WT01	109 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	MEX3A	A1L020	520 aa	Known RBP	4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	LY6L	H3BQJ8	138 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686		M0QX08	132 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	CST4	P01036	141 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	IGLV1-47	P01700	117 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	TROVE2	P10155	538 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	IFI30	P13284	250 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	ANXA7	P20073	488 aa	Known RBP	4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	OTX1	P32242	354 aa	Predicted RBP	4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	PRKX	P51817	358 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	GNG3	P63215	75 aa		4.34	□□□□□ -1.71
ATXN3-223	ENST00000553686	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms