RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 SMIM12Q96EX1 92 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 GALNT14Q96FL9 552 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 SFRP2Q96HF1 295 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TCEAL7Q9BRU2 100 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TLNRD1Q9H1K6 362 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ANKHQ9HCJ1 492 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 NIT2Q9NQR4 276 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 BIN3Q9NQY0 253 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 AGPAT4Q9NRZ5 378 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 NLE1Q9NVX2 485 aaPredicted RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 GLTPQ9NZD2 209 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 CLN8Q9UBY8 286 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PYCARDQ9ULZ3 195 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TFR2Q9UP52 801 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 POLR3HQ9Y535 204 aaPredicted RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 TEP1Q99973 2627 aaKnown RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 SUPT6HQ7KZ85 1726 aaKnown RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 MUC3AQ02505 3323 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CDK13Q14004 1512 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 FANCAO15360 1455 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TCOF1Q13428 1488 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 BCL9O00512 1426 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 MIA2Q96PC5 1412 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 FLT4P35916 1363 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 USP42Q9H9J4 1324 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 TRBV9A0A0B4J1U6 114 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SIGLEC16A6NMB1 481 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 C21orf140B9A014 251 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 G3V2T6 193 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 BHLHE40O14503 412 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 MRPS12O15235 138 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 SLC31A1O15431 190 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CHST10O43529 356 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PLIN3O60664 434 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 FCN3O75636 299 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SCO1O75880 301 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 DCTN3O75935 186 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR2J3O76001 311 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 GPR75O95800 540 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 FAM107AO95990 144 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 C1QCP02747 245 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 ORM1P02763 201 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 MT-ND4P03905 459 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR8U9P0C7N5 309 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 METTL15P1P0C7V9 234 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 C8orf88P0DMB2 117 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 IFI30P13284 250 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 UCHL3P15374 230 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 NQO1P15559 274 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 ZNF25P17030 456 aaPredicted RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 AKR1C4P17516 323 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 GPX2P18283 190 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 NELFEP18615 380 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 PMCHP20382 165 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PAX6P26367 422 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 IVDP26440 423 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 HTR2CP28335 458 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 S100A7P31151 101 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 S100A11P31949 105 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 IFNGR2P38484 337 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CSKP41240 450 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 UQCRFS1P47985 274 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PSMD8P48556 350 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TTPAP49638 278 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 EVX1P49640 407 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PRLHRP49683 370 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 AKR1D1P51857 326 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 ZNF138P52744 262 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TAS2R39P59534 338 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 RPS20P60866 119 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 RPL19P84098 196 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 MLLT11Q13015 90 aaPredicted RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 SKP2Q13309 424 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CDK10Q15131 360 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SMIM21Q3B7S5 101 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PTPN20Q4JDL3 420 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PABPC1L2AQ5JQF8 200 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SPIN3Q5JUX0 258 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 IDNKQ5T6J7 187 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TRIQKQ629K1 86 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 LPCAT4Q643R3 524 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 RWDD4Q6NW29 188 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 SCIMPQ6UWF3 145 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CASP12Q6UXS9 341 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 LRRC28Q86X40 367 aaPredicted RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 TRAPPC5Q8IUR0 188 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 MIR7-3HGQ8N6C7 128 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 LRRC52Q8N7C0 313 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR1M1Q8NGA1 313 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR4F6Q8NGB9 312 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR5L1Q8NGL2 311 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR1L6Q8NGR2 347 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR51F2Q8NH61 342 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 OR5AK3PQ8NH89 298 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 RNASEH2CQ8TDP1 164 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 SFT2D1Q8WV19 159 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 ACOT12Q8WYK0 555 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TFGQ92734 400 aaPredicted RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 GHSRQ92847 366 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms