RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 OR2AT4A6NND4 320 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 FOXI3A8MTJ6 420 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 DISC1C4P0D8 188 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 RFPL4AL1F8VTS6 287 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 MFNGO00587 321 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SCAF4O95104 1147 aaKnown RBP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CLDN1O95832 211 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 OR2H2O95918 312 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 HAND1O96004 215 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CD8AP01732 235 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 IFNA6P05013 189 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CSF3P09919 207 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 AKAIN1P0CW23 69 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 PSG2P11465 335 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 TBPP20226 339 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 GZMHP20718 246 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 DTYMKP23919 212 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CHATP28329 748 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 KIR2DS4P43632 304 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 EFNA4P52798 201 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SNU13P55769 128 aaKnown RBP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 TAS2R46P59540 309 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SRSF1Q07955 248 aaKnown RBP eCLIP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 PLA2G7Q13093 441 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 MEF2DQ14814 521 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 KIR2DS1Q14954 304 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 GRK1Q15835 563 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF79Q15937 498 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 BAK1Q16611 211 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 RGS21Q2M5E4 152 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 PIGYQ3MUY2 71 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 MOGAT2Q3SYC2 334 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 PAN3Q58A45 887 aaKnown RBP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM255AQ5JRV8 349 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 TEX36Q5VZQ5 186 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SLC35E4Q6ICL7 350 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 C11orf71Q6IPW1 123 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 Q6P435 159 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 Q6ZPA2 131 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 C6orf201Q7Z4U5 140 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 TRAPPC6BQ86SZ2 158 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 LURAP1LQ8IV03 231 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 LYSMD2Q8IV50 215 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 IZUMO1Q8IYV9 350 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 GCSAMQ8N6F7 178 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF565Q8N9K5 539 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 POC5Q8NA72 575 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SUMF2Q8NBJ7 301 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 OR52I2Q8NH67 350 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ST8SIA4Q92187 359 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 NINJ1Q92982 152 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 YIPF5Q969M3 257 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SEH1LQ96EE3 360 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF488Q96MN9 340 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SCGB3A2Q96PL1 93 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 FAAP24Q9BTP7 215 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ST6GALNAC5Q9BVH7 336 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 DPCDQ9BVM2 203 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CACNG6Q9BXT2 260 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 KCNK15Q9H427 330 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ZMAT4Q9H898 229 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CHODLQ9H9P2 273 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF286AQ9HBT8 521 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM165Q9HC07 324 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 DCAF16Q9NXF7 216 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 RCC2Q9P258 522 aaKnown RBP4.19□□□□□ -1.74
VTI1B-202ENST00000553619 COPZ2Q9P299 210 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 MIOXQ9UGB7 285 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 SCP2D1Q9UJQ7 156 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 CHD6Q8TD26 2715 aa4.19□□□□□ -1.74
VTI1B-202ENST00000553619 ABCA4P78363 2273 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 A0A0A6YYD4 124 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TRBV6-6A0A0A6YYG2 114 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 IGHV3-64DA0A0J9YX35 117 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 FAM240BA0A1B0GVZ2 78 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 A0A1W2PPH5 198 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ANKRD20A5PA0PJZ0 165 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM30CPA0ZSE6 113 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 A1L4Q6 167 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM235A6NFC5 223 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF736B4DX44 427 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 F8VVB4 439 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 F8VWA3 439 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 PYCARD-AS1I3L0S3 204 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SIRPB1O00241 398 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SLC33A1O00400 549 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 MGST3O14880 152 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 LYRM1O43325 122 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 NDUFB3O43676 98 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 RAB3DO95716 219 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CYB5R3P00387 301 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CSN2P05814 226 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SOD3P08294 240 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DAOP14920 347 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 COL8A2P25067 703 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DUSP1P28562 367 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ERP29P30040 261 aaKnown RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 NPY4RP50391 375 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 PDLIM4P50479 330 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DSCR9P59020 149 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms