RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RALYQ9UKM9 306 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 LRP12Q9Y561 859 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 HS3ST3A1Q9Y663 406 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SELENOKQ9Y6D0 94 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 NPIPB6E9PJ23 425 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 RPL36A-HNRNPH2H7BZ11 118 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ETV2O00321 342 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 NDUFS4O43181 175 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 XRCC2O43543 280 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ZNF207O43670 478 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 BUB3O43684 328 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR2A4O95047 310 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 CPSF4O95639 269 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 IGHG3P01860 377 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 IFNW1P05000 195 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 NGFRP08138 427 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 CXCL1P09341 107 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ESDP10768 282 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 AKR1C4P17516 323 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 MAOAP21397 527 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 PSMB5P28074 263 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 HTR1FP30939 366 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ACVR1BP36896 505 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 H2BFSP57053 126 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 PLPPR5Q32ZL2 321 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TP53I3Q53FA7 332 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR4F3Q6IEY1 312 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 FAM71E1Q6IPT2 247 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 PAQR6Q6TCH4 344 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 ODF3L1Q8IXM7 274 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 SMRP1Q8NCR6 262 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 SLC30A7Q8NEW0 376 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR1B1Q8NGR6 318 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 Q8WTZ3 238 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 GUCD1Q96NT3 240 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR2A7Q96R45 310 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 EFCAB11Q9BUY7 163 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 GABARAPL3Q9BY60 117 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 POLR2J3Q9H1A7 115 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 NOX4Q9NPH5 578 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TAS2R5Q9NYW4 299 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 KCNE5Q9UJ90 142 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TSSC4Q9Y5U2 329 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 EML5Q05BV3 1969 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 A0A1W2PQF6 199 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 LRRC30A6NM36 301 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 SAP18O00422 153 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 MMP23AO75900 390 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TOMM40O96008 361 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 PRH1P02810 166 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ZBTB25P24278 435 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 KDELR2P33947 212 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 CCL11P51671 97 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 MRPS34P82930 218 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 CDK3Q00526 305 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TDRG1Q3Y452 100 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 FFAR4Q5NUL3 377 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 AADACL3Q5VUY0 350 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ZNF626Q68DY1 528 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TNFAIP8L2Q6P589 184 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 C19orf48Q6RUI8 117 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR4F17Q8NGA8 305 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR4D9Q8NGE8 314 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR52R1Q8NGF1 315 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR4F5Q8NH21 305 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ANKRD9Q96BM1 317 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 TSSK3Q96PN8 268 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 OR4F4Q96R69 305 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 FEVQ99581 238 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 RSPO3Q9BXY4 272 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 LINC00597Q9H2U6 94 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TMEM38BQ9NVV0 291 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 RASD1Q9Y272 281 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 NOP16Q9Y3C1 178 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 HS3ST3B1Q9Y662 390 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 FER1L5A0AVI2 2057 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TMEM213A2RRL7 107 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 HEPACAM2A8MVW5 462 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 SNRPGP15A8MWD9 76 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 PPP5D1E7EU14 171 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 G3V4G9 280 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 MS4A18H0YCH9 400 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 SPINT2O43291 252 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 TRAF3IP2O43734 574 aaPredicted RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 EIF4E2O60573 245 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 HLA-DPB1P04440 258 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 APODP05090 189 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 SDC1P18827 310 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 CELP19835 753 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 PTGER1P34995 402 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 HTR6P50406 440 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 FABP6P51161 128 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 RPL32P62910 135 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 RUNX3Q13761 415 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 EBPQ15125 230 aaKnown RBP3.49□□□□□ -1.85
RDH11-204ENST00000553578 SLC36A2Q495M3 483 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
RDH11-204ENST00000553578 ZNF385BQ569K4 471 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms