RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 PEX14O75381 377 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 OR7C1O76099 320 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-207ENST00000553290 TSPAN15O95858 294 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 IL1AP01583 271 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 VSIG10L2P0DP72 767 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 GTF2F2P13984 249 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 CELP19835 753 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 SERPINA2P20848 420 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 NFYBP25208 207 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 MPV17LQ2QL34 196 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-207ENST00000553290 CCDC144NLQ6NUI1 221 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 SLC16A12Q6ZSM3 486 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 CDH26Q8IXH8 852 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 NANOGP1Q8N7R0 232 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 SUMF2Q8NBJ7 301 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 OR10A7Q8NGE5 316 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 PLPPR1Q8TBJ4 325 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 THRSPQ92748 146 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 TFAP2CQ92754 450 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 OR14A2Q96R54 314 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 DPCDQ9BVM2 203 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-207ENST00000553290 MMP28Q9H239 520 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 IDI2-AS1Q9NZ38 188 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 ERGIC3Q9Y282 383 aa10.4□□□□□ -0.74
ACTN1-207ENST00000553290 AMMECR1Q9Y4X0 333 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-207ENST00000553290 TRAV8-7A0A075B6U6 113 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 PNMA8CA0A1B0GUJ8 204 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 NPIPB11E5RHQ5 1161 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 ANKRD65E5RJM6 399 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 GEMIN2O14893 280 aaKnown RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 GZMHP20718 246 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 MAPK3P27361 379 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 MNDAP41218 407 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 BLCAPP62952 87 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 DEFA6Q01524 100 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 DOC2BQ14184 412 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 RBM39Q14498 530 aaKnown RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 HABP2Q14520 560 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 SLC22A6Q4U2R8 563 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 TPTE2P1Q5T6R2 138 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 FAM110DQ8TAY7 271 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 MRGPRDQ8TDS7 321 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 CAPSLQ8WWF8 208 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 MRPS24Q96EL2 167 aaKnown RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 DERL3Q96Q80 235 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 LIN7BQ9HAP6 207 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 FKBP14Q9NWM8 211 aa10.39□□□□□ -0.75
ACTN1-207ENST00000553290 MRPS28Q9Y2Q9 187 aaKnown RBP10.39□□□□□ -0.75
ACTN1-207ENST00000553290 A0A1W2PPK0 400 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 TMEM30CPA0ZSE6 113 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 MAGEA13PA6NCF6 341 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 J3QR06 171 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 KCNAB3O43448 404 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 FBXO24O75426 580 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 MAS1P04201 325 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 VDAC2P45880 294 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-207ENST00000553290 ATAD3CQ5T2N8 411 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 RNLSQ5VYX0 342 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 JAGN1Q8N5M9 183 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 C11orf44Q8N8P7 122 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 NEK7Q8TDX7 302 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 MUL1Q969V5 352 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 RPEQ96AT9 228 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 WNT10AQ9GZT5 417 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 SPACA1Q9HBV2 294 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 PSG11Q9UQ72 335 aa10.38□□□□□ -0.75
ACTN1-207ENST00000553290 OR2F2O95006 317 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 CDK1P06493 297 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 CD24P25063 80 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 SSTR5P35346 364 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 EMX1Q04741 257 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-207ENST00000553290 C6orf141Q5SZD1 244 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 AWAT2Q6E213 333 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 Q6ZS46 218 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 THNSL2Q86YJ6 484 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 NKAIN3Q8N8D7 197 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 RFESDQ8TAC1 157 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-207ENST00000553290 MYDGFQ969H8 173 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 TOMM40LQ969M1 308 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 RBM14Q96PK6 669 aaKnown RBP10.37□□□□□ -0.75
ACTN1-207ENST00000553290 SLC25A33Q9BSK2 321 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 MND1Q9BWT6 205 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 SCN3BQ9NY72 215 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 ZNF581Q9P0T4 197 aa10.37□□□□□ -0.75
ACTN1-207ENST00000553290 NKX1-2Q9UD57 310 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-207ENST00000553290 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 TRAV39A0A0B4J263 110 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 A0A1W2PP11 408 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A10PA6NDY2 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A18PA6NE21 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A16PA6NEW6 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A20PA6NIJ5 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A7PA6NKC0 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A12PA8MX19 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A5PA8MXJ8 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A23PA8MXZ1 464 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms