RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KRTAP24-1Q3LI83 254 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 SLC35E4Q6ICL7 350 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 RAB12Q6IQ22 244 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 FAM3DQ96BQ1 224 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 MDFIQ99750 246 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 TAS2R3Q9NYW6 316 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 STEAP1Q9UHE8 339 aa11.51□□□□□ -0.57
PTCH1-226ENST00000553011 A0A0A6YYD4 124 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 A0A0B4J203 849 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 MEIOCA2RUB1 952 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 DNAJC9-AS1A6NH13 148 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 IFITM5A6NNB3 132 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 PDCD6O75340 191 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 CGB3P0DN86 165 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 CGB7P0DN87 165 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 FUT3P21217 361 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 OMGP23515 440 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 CDK2P24941 298 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 PLA2G7Q13093 441 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 BAMBIQ13145 260 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 C17orf58Q2M2W7 97 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 C2orf76Q3KRA6 126 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 NKAPLQ5M9Q1 402 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 OR2W3Q7Z3T1 314 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 MRGPRDQ8TDS7 321 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 C17orf50Q8WW18 174 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 DYRK2Q92630 601 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 YIPF6Q96EC8 236 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 CENPOQ9BU64 300 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 TM2D1Q9BX74 207 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 LPAR5Q9H1C0 372 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 GAL3ST2Q9H3Q3 398 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 PRDM13Q9H4Q3 707 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 NCOR1P1Q9H4R4 102 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 SESN1Q9Y6P5 492 aa11.5□□□□□ -0.57
PTCH1-226ENST00000553011 TMEM272A0A1B0GTI8 110 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 TMEM30CPA0ZSE6 113 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 UBE2QL1A1L167 161 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 FAM172BPA6NC97 362 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 ZNF729A6NN14 1252 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-226ENST00000553011 RNF212BA8MTL3 300 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 MCRIP1C9JLW8 97 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 CLEC2LP0C7M8 214 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-226ENST00000553011 CHATP28329 748 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 SDC2P34741 201 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 UBA52P62987 128 aaKnown RBP11.49□□□□□ -0.57
PTCH1-226ENST00000553011 RBM39Q14498 530 aaKnown RBP11.49□□□□□ -0.57
PTCH1-226ENST00000553011 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 ZNF497Q6ZNH5 498 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 RTN4RL2Q86UN3 420 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 AJUBAQ96IF1 538 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 KCTD7Q96MP8 289 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 TMEM133Q9H2Q1 129 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 ETAA1Q9NY74 926 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 CALYQ9NYX4 217 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
PTCH1-226ENST00000553011 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 AIPO00170 330 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 LDLRAD4O15165 306 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 HOXA3O43365 443 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-226ENST00000553011 MT-ND4P03905 459 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 MELTFP08582 738 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 PAX6P26367 422 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 CFPP27918 469 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 SSTR5P35346 364 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 MXD1Q05195 221 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 SLC9A3R2Q15599 337 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 MIDNQ504T8 468 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 UTF1Q5T230 341 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 Q6YL49 198 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 C6orf201Q7Z4U5 140 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 TPRA1Q86W33 373 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 ZNF565Q8N9K5 539 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 OR13D1Q8NGV5 346 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 RFESDQ8TAC1 157 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 TMEM158Q8WZ71 300 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 NEDD4LQ96PU5 975 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 SULT4A1Q9BR01 284 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 URM1Q9BTM9 101 aaKnown RBP11.48□□□□□ -0.57
PTCH1-226ENST00000553011 FBLN5Q9UBX5 448 aa11.48□□□□□ -0.57
PTCH1-226ENST00000553011 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 NOTOA8MTQ0 251 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 ODF3BA8MYP8 253 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 TRIM77I1YAP6 450 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 SOCS1O15524 211 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 AIREO43918 545 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 IL1AP01583 271 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 ARG1P05089 322 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 GLAP06280 429 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 FBP1P09467 338 aa11.47□□□□□ -0.57
PTCH1-226ENST00000553011 BLVRBP30043 206 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms