RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 BARHL1Q9BZE3 327 aa9.4□□□□□ -0.9
TMEM116-218ENST00000552839 DIABLOQ9NR28 239 aa9.4□□□□□ -0.9
TMEM116-218ENST00000552839 ETAA1Q9NY74 926 aa9.4□□□□□ -0.9
TMEM116-218ENST00000552839 ONECUT1Q9UBC0 465 aa9.4□□□□□ -0.9
TMEM116-218ENST00000552839 DUX4Q9UBX2 424 aa9.4□□□□□ -0.9
TMEM116-218ENST00000552839 SPATA2Q9UM82 520 aa9.4□□□□□ -0.9
TMEM116-218ENST00000552839 TRBV23-1A0A0A0MS06 115 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 TMEM30CPA0ZSE6 113 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 UBE2QL1A1L167 161 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 K7N7A8 449 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 GLP1RP43220 463 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 SEC61A1P61619 476 aaKnown RBP9.39□□□□□ -0.91
TMEM116-218ENST00000552839 RPL31P62899 125 aaKnown RBP9.39□□□□□ -0.91
TMEM116-218ENST00000552839 KRBOX4Q5JUW0 171 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 RBMS3Q6XE24 437 aaKnown RBP9.39□□□□□ -0.91
TMEM116-218ENST00000552839 Q6ZTK2 550 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 BTN2A1Q7KYR7 527 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 CMTM4Q8IZR5 234 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 Q8NFD4 153 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 OR4M1Q8NGD0 313 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 MCFD2Q8NI22 146 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 SETD6Q8TBK2 473 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 RAB3CQ96E17 227 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 S100A16Q96FQ6 103 aaKnown RBP9.39□□□□□ -0.91
TMEM116-218ENST00000552839 TM2D1Q9BX74 207 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 LPAR5Q9H1C0 372 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 FBLN5Q9UBX5 448 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 MAB21L2Q9Y586 359 aa9.39□□□□□ -0.91
TMEM116-218ENST00000552839 MEIKINA0A087WXM9 373 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 TRGV10A0A0A0MS01 117 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 hCG_1809904A0A1W2PP81 198 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 A0A1W2PPE2 198 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 A0A1W2PR64 198 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 A0A1W2PRV1 198 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 hADV38S2A0JD32 116 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 CD3GP09693 182 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 CD37P11049 281 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 S100A5P33763 92 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 MNDAP41218 407 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 OR3A1P47881 315 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 EFNB2P52799 333 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 P2RX3P56373 397 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 DYNC1I2Q13409 638 aaKnown RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 ARFRP1Q13795 201 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 TMEM69Q5SWH9 247 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 Q6P435 159 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 METAP1DQ6UB28 335 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 OR4S1Q8NGB4 309 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 OR5H6Q8NGV6 325 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 OR10R2Q8NGX6 335 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 DYNC2LI1Q8TCX1 351 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 RAB40AQ8WXH6 277 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 ZNF48Q96MX3 618 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 NUDT16L1Q9BRJ7 211 aaKnown RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 RBM38Q9H0Z9 239 aaKnown RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 IFT22Q9H7X7 185 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 SEBOXQ9HB31 216 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-218ENST00000552839 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 ZNF69Q9UC07 566 aa9.38□□□□□ -0.91
TMEM116-218ENST00000552839 TRAV24A0A0B4J272 114 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 PPIAL4CA0A0B4J2A2 164 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 TMEM82A0PJX8 343 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 A8MXK9 166 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 PSPNO60542 156 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 ZNF737O75373 536 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 GLAP06280 429 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 LIPFP07098 398 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 RNASE1P07998 156 aaKnown RBP9.37□□□□□ -0.91
TMEM116-218ENST00000552839 PPIAL4GP0DN37 164 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-218ENST00000552839 GNG2P59768 71 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 QRFPP83859 136 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 AESQ08117 197 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 BAMBIQ13145 260 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 METTL11BQ5VVY1 283 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 C6orf201Q7Z4U5 140 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 TPRX1Q8N7U7 411 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 CMSS1Q9BQ75 279 aaKnown RBP9.37□□□□□ -0.91
TMEM116-218ENST00000552839 DCTN5Q9BTE1 182 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 GAL3ST2Q9H3Q3 398 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 ZMAT3Q9HA38 289 aaKnown RBP9.37□□□□□ -0.91
TMEM116-218ENST00000552839 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 OR6C3Q9NZP0 311 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 NUP50Q9UKX7 468 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 CMYA5Q8N3K9 4069 aa9.37□□□□□ -0.91
TMEM116-218ENST00000552839 PRKDCP78527 4128 aaKnown RBP9.36□□□□□ -0.91
TMEM116-218ENST00000552839 TRAV18A0A075B6X5 111 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 A0A0A6YYH2 397 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 IGHV2-70DA0A0C4DH43 119 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 ODAMA1E959 279 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 A6NJ64 397 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 LDLRAD4O15165 306 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 SOCS1O15524 211 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 HPGDSO60760 199 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 CA11O75493 328 aa9.36□□□□□ -0.91
TMEM116-218ENST00000552839 APOA1P02647 267 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms