RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PXT1Q8NFP0 134 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 TMEM203Q969S6 136 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 S100A13Q99584 98 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 SEBOXQ9HB31 216 aaPredicted RBP9.53□□□□□ -0.88
CKAP4-202ENST00000552828 HMG20AQ9NP66 347 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 DNAH9Q9NYC9 4486 aa9.52□□□□□ -0.88
CKAP4-202ENST00000552828 HAND1O96004 215 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 CALCBP10092 127 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 JUNBP17275 347 aaPredicted RBP9.52□□□□□ -0.89
CKAP4-202ENST00000552828 MTNR1BP49286 362 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 CD83Q01151 205 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 COL10A1Q03692 680 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 INSL4Q14641 139 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF146Q15072 292 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 RSU1Q15404 277 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 HSD17B12Q53GQ0 312 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF773Q6PK81 442 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 ASCL4Q6XD76 172 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF782Q6ZMW2 699 aaPredicted RBP9.52□□□□□ -0.89
CKAP4-202ENST00000552828 GPR141Q7Z602 305 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 CDH26Q8IXH8 852 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 JAGN1Q8N5M9 183 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 OR13D1Q8NGV5 346 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 PHYHIPQ92561 330 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 FCGR1BQ92637 280 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 PCDHB16Q9NRJ7 776 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 ABCB10Q9NRK6 738 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 ING4Q9UNL4 249 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 GSTK1Q9Y2Q3 226 aa9.52□□□□□ -0.89
CKAP4-202ENST00000552828 FAM90A22PA8MWA6 464 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 SH2D1BO14796 132 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF737O75373 536 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 SC5DO75845 299 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 ARG1P05089 322 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 IGHV1-8P0DP01 117 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 SRMP19623 302 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 DUSP1P28562 367 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 OR3A4PP47883 348 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 SNU13P55769 128 aaKnown RBP9.51□□□□□ -0.89
CKAP4-202ENST00000552828 RPS25P62851 125 aaKnown RBP9.51□□□□□ -0.89
CKAP4-202ENST00000552828 BLCAPP62952 87 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 SSX2Q16385 188 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 UBE2UQ5VVX9 321 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 ELP2Q6IA86 826 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 Q6ZS46 218 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 NKAIN3Q8N8D7 197 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 ASCC1Q8N9N2 400 aaKnown RBP9.51□□□□□ -0.89
CKAP4-202ENST00000552828 SNX22Q96L94 193 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 OCSTAMPQ9BR26 566 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 METTL9Q9H1A3 318 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 EXOSC4Q9NPD3 245 aaKnown RBP9.51□□□□□ -0.89
CKAP4-202ENST00000552828 IL36RNQ9UBH0 155 aa9.51□□□□□ -0.89
CKAP4-202ENST00000552828 DEGS1O15121 323 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF780AO75290 641 aaPredicted RBP9.5□□□□□ -0.89
CKAP4-202ENST00000552828 ARL6IP5O75915 188 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 CDRT1O95170 752 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 HTR3BO95264 441 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 CSTBP04080 98 aaKnown RBP9.5□□□□□ -0.89
CKAP4-202ENST00000552828 UCHL1P09936 223 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 GABRR1P24046 479 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 PSMB9P28065 219 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 SCN1BQ07699 218 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 GPR176Q14439 515 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 PLA1AQ53H76 456 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 VAX1Q5SQQ9 334 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 FAM27D1Q5T7N8 215 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 MINOS1Q5TGZ0 78 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 GLT8D1Q68CQ7 371 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 TMEM91Q6ZNR0 172 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 Q8NFD4 153 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 MUL1Q969V5 352 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 UQCC2Q9BRT2 126 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 ETAA1Q9NY74 926 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 IL36GQ9NZH8 169 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 MINOS1-NBL1R4GNA1 71 aa9.5□□□□□ -0.89
CKAP4-202ENST00000552828 TMEM82A0PJX8 343 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 SIRPB1O00241 398 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 CCRL2O00421 344 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 PEX14O75381 377 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 OR2H2O95918 312 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF44P15621 663 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 IGLL1P15814 213 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 LMO1P25800 156 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 VDAC2P45880 294 aaPredicted RBP9.49□□□□□ -0.89
CKAP4-202ENST00000552828 GP2P55259 537 aaKnown RBP9.49□□□□□ -0.89
CKAP4-202ENST00000552828 FABP5Q01469 135 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 MEF2CQ06413 473 aaPredicted RBP9.49□□□□□ -0.89
CKAP4-202ENST00000552828 DCTN2Q13561 401 aaKnown RBP9.49□□□□□ -0.89
CKAP4-202ENST00000552828 SSX1Q16384 188 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 SLC22A6Q4U2R8 563 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 GLIPR1L1Q6UWM5 242 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 GDPD3Q7L5L3 318 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 TCF23Q7RTU1 214 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 LRRTM1Q86UE6 522 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 CROCCP3Q8IVE0 287 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 OR8H2Q8N162 312 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 CHST4Q8NCG5 386 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms