RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 RAG2P55895 527 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 RPL15P61313 204 aaKnown RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 SLC35A2P78381 396 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 RBM39Q14498 530 aaKnown RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 LRRC75BQ2VPJ9 315 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 PIGYQ3MUY2 71 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 HSD17B12Q53GQ0 312 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 PLA1AQ53H76 456 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 LIPKQ5VXJ0 399 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 RNLSQ5VYX0 342 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 GLT8D1Q68CQ7 371 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 ELP2Q6IA86 826 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 DHRS7BQ6IAN0 325 aaPredicted RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 ZNF529Q6P280 563 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 GLIPR1L1Q6UWM5 242 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 CEACAM19Q7Z692 300 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 LINC00596Q86U02 117 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 CDH26Q8IXH8 852 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 DTX3Q8N9I9 347 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 ZNF565Q8N9K5 539 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 BEND2Q8NDZ0 799 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 OR51T1Q8NGJ9 327 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 ZNF596Q8TC21 504 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 CAPSLQ8WWF8 208 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 TNFRSF14Q92956 283 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 FOXRED1Q96CU9 486 aaPredicted RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 PGLYRP3Q96LB9 341 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 C1orf147Q96MC9 270 aaPredicted RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 DERL3Q96Q80 235 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 OR5M11Q96RB7 305 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 NKX3-1Q99801 234 aaPredicted RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 TMEM133Q9H2Q1 129 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 RAB18Q9NP72 206 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 FKBP14Q9NWM8 211 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 TAS2R3Q9NYW6 316 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 VPREB3Q9UKI3 123 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 TBL2Q9Y4P3 447 aaKnown RBP4.81□□□□□ -1.64
CCDC65-204ENST00000552188 SESN1Q9Y6P5 492 aa4.81□□□□□ -1.64
CCDC65-204ENST00000552188 FBN1P35555 2871 aaKnown RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 TRAV8-7A0A075B6U6 113 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 TRBV5-7A0A0A0MS05 114 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 TMEM30CPA0ZSE6 113 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ZNF729A6NN14 1252 aaPredicted RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 F2RL2O00254 374 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 GEMIN2O14893 280 aaKnown RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ARL6IP5O75915 188 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 CSN2P05814 226 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 IGFBP3P17936 291 aaPredicted RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MDKP21741 143 aaPredicted RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 CRHBPP24387 322 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PSMA1P25786 263 aaKnown RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 HTR1DP28221 377 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 CEACAM3P40198 252 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 KCNJ3P48549 501 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 COMPP49747 757 aaPredicted RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 RBM11P57052 281 aaKnown RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 RPS11P62280 158 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 GPR50Q13585 617 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 SSX2Q16385 188 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 TAF9Q16594 264 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 LTC4SQ16873 150 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MPV17LQ2QL34 196 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MINOS1Q5TGZ0 78 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PRAMEF5Q5TYX0 476 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ASPHD2Q6ICH7 369 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 Q6P435 159 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ASCL4Q6XD76 172 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PRSS48Q7RTY5 328 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 RTN4RL2Q86UN3 420 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ABHD12Q8N2K0 398 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 SUMF2Q8NBJ7 301 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ZNF485Q8NCK3 441 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 CORO2AQ92828 525 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 TMEM203Q969S6 136 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 CREB3L1Q96BA8 519 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MALSU1Q96EH3 234 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MRPS24Q96EL2 167 aaKnown RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 UQCC2Q9BRT2 126 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 DPCDQ9BVM2 203 aaPredicted RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 SELENOIQ9C0D9 397 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 CST11Q9H112 138 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MEGF9Q9H1U4 602 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PPIL3Q9H2H8 161 aaKnown RBP4.8□□□□□ -1.64
CCDC65-204ENST00000552188 DUSP21Q9H596 190 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PLGRKTQ9HBL7 147 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 SPACA1Q9HBV2 294 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 RAB9BQ9NP90 201 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 ISYNA1Q9NPH2 558 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 IL36GQ9NZH8 169 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 KIF25Q9UIL4 384 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PITPNC1Q9UKF7 332 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 RNF114Q9Y508 228 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 HILPDAQ9Y5L2 63 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 PEX16Q9Y5Y5 336 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 MINOS1-NBL1R4GNA1 71 aa4.8□□□□□ -1.64
CCDC65-204ENST00000552188 TET2Q6N021 2002 aaPredicted RBP4.79□□□□□ -1.64
CCDC65-204ENST00000552188 IGHV2-26A0A0B4J1V2 119 aa4.79□□□□□ -1.64
CCDC65-204ENST00000552188 TRAV24A0A0B4J272 114 aa4.79□□□□□ -1.64
CCDC65-204ENST00000552188 A0A1W2PP11 408 aa4.79□□□□□ -1.64
CCDC65-204ENST00000552188 CLPSL1A2RUU4 121 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms