RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 C12orf29Q8N999 325 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 OR6N2Q8NGY6 317 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 LGALS14Q8TCE9 139 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 RDH5Q92781 318 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 NTAN1Q96AB6 310 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 BMFQ96LC9 184 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ZFP3Q96NJ6 502 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 BEX2Q9BXY8 128 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ULBP2Q9BZM5 246 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 TMEM38AQ9H6F2 299 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 MMP26Q9NRE1 261 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 MCUBQ9NWR8 336 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF226Q9NYT6 803 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 TAS2R9Q9NYW1 312 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 MRM2Q9UI43 246 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 RCL1Q9Y2P8 373 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 YARS2Q9Y2Z4 477 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 STARD9Q9P2P6 4700 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF99A8MXY4 864 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-206ENST00000550987 KRTAP4-16G5E9R7 235 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-206ENST00000550987 SMIM24O75264 130 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 RDH16O75452 317 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 BGLAPP02818 100 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 FABP3P05413 133 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CT45A6P0DMU7 189 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CT45A5P0DMU8 189 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CT45A7P0DMV0 189 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CRISP2P16562 243 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF7P17097 686 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-206ENST00000550987 RAB3BP20337 219 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 PMCHP20382 165 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 DTYMKP23919 212 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 NUDT1P36639 197 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CEACAM6P40199 344 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 MAGEA3P43357 314 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 GNG10P50151 68 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 RND2P52198 227 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ATP5J2P56134 94 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CCL7P80098 99 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 IHHQ14623 411 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 EXOC3L4Q17RC7 722 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 KRTAP27-1Q3LI81 207 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 TTLL9Q3SXZ7 439 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CT45A1Q5HYN5 189 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 PRMT9Q6P2P2 845 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ASCL4Q6XD76 172 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CLEC20AQ6ZU45 233 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 SSX7Q7RTT5 188 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF584Q8IVC4 421 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CBR4Q8N4T8 237 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CT45A3Q8NHU0 189 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ACTRT1Q8TDG2 376 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 LMX1AQ8TE12 382 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 PHF10Q8WUB8 498 aaKnown RBP3.7□□□□□ -1.82
CPSF6-206ENST00000550987 APH1BQ8WW43 257 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CDS1Q92903 461 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 TMEM230Q96A57 120 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ISOC2Q96AB3 205 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 RNF170Q96K19 258 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 RNF145Q96MT1 663 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 HDHD3Q9BSH5 251 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF426Q9BUY5 554 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 CALN1Q9BXU9 219 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 SYT4Q9H2B2 425 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 FAM49BQ9NUQ9 324 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 UVRAGQ9P2Y5 699 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF225Q9UK10 706 aa3.7□□□□□ -1.82
CPSF6-206ENST00000550987 SPTY2D1-AS1A0A0U1RR47 76 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 GNG14A0A1W2PPG7 69 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 A0A1W2PRF3 423 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 A0A1W2PRM7 423 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 EFCAB10A6NFE3 127 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 TMX2-CTNND1H3BSU7 103 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 AQP9O43315 295 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 RAD51CO43502 376 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 GMDSO60547 372 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 ENTPD5O75356 428 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 APOEP02649 317 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 OR5H8P0DN80 308 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CRABP2P29373 138 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CEACAM3P40198 252 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CD79BP40259 229 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CTRLP40313 264 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CDKN2BP42772 138 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 NMUP48645 174 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 IDH2P48735 452 aaKnown RBP3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CYB561P49447 251 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 NCBP2P52298 156 aaKnown RBP eCLIP3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CXCR4P61073 352 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 MADCAM1Q13477 382 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 PON3Q15166 354 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 ACTBL2Q562R1 376 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 TPRG1LQ5T0D9 272 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 SPOPLQ6IQ16 392 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 IL34Q6ZMJ4 242 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 C6orf120Q7Z4R8 191 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 HORMAD1Q86X24 394 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 VKORC1L1Q8N0U8 176 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms