RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 SLAMF6Q96DU3 332 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 REEP6Q96HR9 211 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 TPD52L3Q96J77 140 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 C7orf34Q96L11 122 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RBM14Q96PK6 669 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ERMAPQ96PL5 475 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 MICU1Q9BPX6 476 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 SLC25A33Q9BSK2 321 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 PARD6BQ9BYG5 372 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 NMNAT2Q9BZQ4 307 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 NDEL1Q9GZM8 345 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 OR51I2Q9H344 312 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 OR52D1Q9H346 318 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 FN3KQ9H479 309 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 TMBIM4Q9HC24 238 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 CHMP1AQ9HD42 196 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RPRD1BQ9NQG5 326 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF446Q9NWS9 450 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 CMTM6Q9NX76 183 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RASL12Q9NYN1 266 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 NKIRAS1Q9NYS0 192 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 USE1Q9NZ43 259 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 HHLA2Q9UM44 414 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ENPP4Q9Y6X5 453 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 MINOS1-NBL1R4GNA1 71 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 DNAH11Q96DT5 4516 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 PKD1P98161 4303 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 A0A1W2PRV1 198 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 DHRS12A0PJE2 317 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 TVP23AA6NH52 213 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RFPL4AA6NLU0 287 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF850A8MQ14 1090 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF878C9JN71 531 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RFPL4AL1F8VTS6 287 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 K7N7A8 449 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF593O00488 134 aaPredicted RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 PFDN1O60925 122 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF682O95780 498 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 CLIC3O95833 236 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ARG1P05089 322 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 H1F0P07305 194 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 PRSS2P07478 247 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 SNRNP70P08621 437 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF728P0DKX0 622 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 IGHV1-8P0DP01 117 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 VPREB1P12018 145 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 FCGR1AP12314 374 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF3P17036 446 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 GLRA1P23415 457 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 CFL1P23528 166 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 SLC6A1P30531 599 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 SLC6A6P31641 620 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 PYCR1P32322 319 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OPRL1P41146 370 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 GABRA2P47869 451 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 GSSP48637 474 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 CD81P60033 236 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 GMFBP60983 142 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RPL23AP62750 156 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 GRB2P62993 217 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 MRPS15P82914 257 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 PRDX4Q13162 271 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 CBX3Q13185 183 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 SNCBQ16143 134 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 CEACAM21Q3KPI0 293 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ABCA11PQ4W5N1 156 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 FAM98BQ52LJ0 330 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 IFI44LQ53G44 452 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 FGD3Q5JSP0 725 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 LINC01590Q5TEZ4 76 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 C8orf82Q6P1X6 216 aaPredicted RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ACP7Q6ZNF0 438 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 TCF23Q7RTU1 214 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR2W3Q7Z3T1 314 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 PIGWQ7Z7B1 504 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 SBSPONQ8IVN8 264 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OSR2Q8N2R0 312 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF561Q8N587 486 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RPP25LQ8N5L8 163 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 POC1AQ8NBT0 407 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 NEXN-AS1Q8NBZ9 246 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 TMEM185AQ8NFB2 350 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR2T12Q8NG77 320 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR4M1Q8NGD0 313 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR51D1Q8NGF3 324 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR4X2Q8NGF9 303 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR4C15Q8NGM1 316 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR13D1Q8NGV5 346 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR2T27Q8NH04 317 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF671Q8TAW3 534 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RNF133Q8WVZ7 376 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RNF170Q96K19 258 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RCHY1Q96PM5 261 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 OR8B4Q96RC9 309 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 TSC22D3Q99576 134 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 COPS4Q9BT78 406 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RTL8AQ9BWD3 113 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 PAPOLGQ9BWT3 736 aaKnown RBP2.76□□□□□ -1.97
LIMA1-206ENST00000550611 C1QTNF4Q9BXJ3 329 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 RGCCQ9H4X1 137 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms