RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 KIF25Q9UIL4 384 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 ST3GAL6Q9Y274 331 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 TSSC4Q9Y5U2 329 aaPredicted RBP8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 HSPE1-MOB4S4R3N1 261 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 TCRBV4S1A1TA0A5B7 111 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A18PA6NE21 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A16PA6NEW6 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A20PA6NIJ5 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A9PA6NNJ1 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A12PA8MX19 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A5PA8MXJ8 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 HSPB6O14558 160 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 CLIC3O95833 236 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A15PP0C7V4 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A13PP0C7W8 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A14PP0C7W9 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A24PP0C7X0 464 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 GTF2F2P13984 249 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 JUNBP17275 347 aaPredicted RBP8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 GDNFP39905 211 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 ETV1P50549 477 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 TAS2R43P59537 309 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 RIPK1Q13546 671 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 MPV17LQ2QL34 196 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 ABCA11PQ4W5N1 156 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 YIF1BQ5BJH7 314 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 DDI2Q5TDH0 399 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 RSBN1Q5VWQ0 802 aaPredicted RBP8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 Q6ZS46 218 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 CDH26Q8IXH8 852 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR8H3Q8N146 312 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR51A2Q8NGJ7 313 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR52M1Q8NGK5 317 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR52N1Q8NH53 320 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 THRSPQ92748 146 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 MRPS24Q96EL2 167 aaKnown RBP8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 PPIL3Q9H2H8 161 aaKnown RBP8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 NECAP2Q9NVZ3 263 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 PSG11Q9UQ72 335 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 MOB4Q9Y3A3 225 aa8.69□□□□□ -1.02
VTI1BP3-201ENST00000550220 TMEM30CPA0ZSE6 113 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM172BPA6NC97 362 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 EFCAB10A6NFE3 127 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 ORC5O43913 435 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR7C1O76099 320 aaPredicted RBP8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 CDRT1O95170 752 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 DUS4LO95620 317 aaKnown RBP8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 LPLP06858 475 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 PF4V1P10720 104 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 CD24P25063 80 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 RBM11P57052 281 aaKnown RBP8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 SMN1Q16637 294 aaKnown RBP8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 TMEM30BQ3MIR4 351 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 PIGYQ3MUY2 71 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 Q3ZCU0 254 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 Q499Y3 187 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR2G6Q5TZ20 316 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 DMKNQ6E0U4 476 aaPredicted RBP8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 BAIAP2L2Q6UXY1 529 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 LYG1Q8N1E2 194 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 STX19Q8N4C7 294 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 DHRSXQ8N5I4 330 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 C8orf31Q8N9H6 132 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 SUMF2Q8NBJ7 301 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR13A1Q8NGR1 328 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 MRGPRDQ8TDS7 321 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 RGP1Q92546 391 aaPredicted RBP8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 GHSRQ92847 366 aa8.68□□□□□ -1.02
VTI1BP3-201ENST00000550220 TRBV5-5A0A0J9YX44 114 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 ADARB2-AS1A8MUL3 147 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 CCRL2O00421 344 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 FGF16O43320 207 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 CA11O75493 328 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 GAPDHP04406 335 aaKnown RBP8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 IGFBP3P17936 291 aaPredicted RBP8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 CD33P20138 364 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 IL3RAP26951 378 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 SLC6A1P30531 599 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 HES1Q14469 280 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 LINC00311Q8N616 119 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 COMMD1Q8N668 190 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR10K1Q8NGX5 313 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 RFESDQ8TAC1 157 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 DSCAML1Q8TD84 2053 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 CHPT1Q8WUD6 406 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 CYGBQ8WWM9 190 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 SGCDQ92629 289 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 ZNF184Q99676 751 aaPredicted RBP8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 CNOT2Q9NZN8 540 aaKnown RBP8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 TGP01266 2768 aa8.67□□□□□ -1.02
VTI1BP3-201ENST00000550220 KIAA2026Q5HYC2 2103 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 PSMB11A5LHX3 300 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 MCRIP1C9JLW8 97 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 GEMIN2O14893 280 aaKnown RBP8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 PF4P02776 101 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 AMY1AP04745 511 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 AMY2AP04746 511 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 CD1AP06126 327 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 GLAP06280 429 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms