RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CALHM1Q8IU99 346 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF561Q8N587 486 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 NABP1Q96AH0 204 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 PARP11Q9NR21 331 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 LUZP4Q9P127 313 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 OTOGLQ3ZCN5 2332 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 IGKV1-27A0A075B6S5 117 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 FIGNL2A6NMB9 653 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 FAM157AC9JC47 383 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF587BE7ETH6 402 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 OR2C1O95371 312 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 GDF1P27539 372 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 FGF8P55075 233 aaPredicted RBP9.55□□□□□ -0.88
LINC00661-204ENST00000549354 IL15RAQ13261 267 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 OR1C1Q15619 314 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 CXorf66Q5JRM2 361 aaPredicted RBP9.55□□□□□ -0.88
LINC00661-204ENST00000549354 CRIP3Q6Q6R5 217 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 MED12LQ86YW9 2145 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 SKA3Q8IX90 412 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 C15orf54Q8N8G6 183 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 GJC3Q8NFK1 279 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 OR1K1Q8NGR3 316 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 MOB1AQ9H8S9 216 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 H0YL77 283 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 CELA3AP09093 270 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 HAAOP46952 286 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF92Q03936 586 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 KIAA0141Q14154 515 aaPredicted RBP9.54□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF674Q2M3X9 581 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 AAED1Q7RTV5 226 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 LRP11Q86VZ4 500 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 SLC2A9Q9NRM0 540 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 ZMAT5Q9UDW3 170 aaKnown RBP9.54□□□□□ -0.88
LINC00661-204ENST00000549354 BORCS7-ASMTA0A0B4J1R7 106 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 SPAARA0A1B0GVQ0 90 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 TAAR5O14804 337 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 IAPPP10997 89 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 TUBG1P23258 451 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 THBS4P35443 961 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 FAM53AQ6NSI3 398 aaPredicted RBP9.54□□□□□ -0.88
LINC00661-204ENST00000549354 SUMF2Q8NBJ7 301 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 OR2G3Q8NGZ4 309 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 NELFAQ9H3P2 528 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 CRIM1Q9NZV1 1036 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 RNF150Q9ULK6 438 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 LIPGQ9Y5X9 500 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 C5orf49A4QMS7 147 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 CYTIPO60759 359 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 RBMXL2O75526 392 aaKnown RBP9.54□□□□□ -0.88
LINC00661-204ENST00000549354 DHRS3O75911 302 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 HEXAP06865 529 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 DEFA4P12838 97 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 ENDOGQ14249 297 aaKnown RBP9.54□□□□□ -0.88
LINC00661-204ENST00000549354 IL22RA1Q8N6P7 574 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF251Q9BRH9 671 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 ZDHHC8Q9ULC8 765 aa9.54□□□□□ -0.88
LINC00661-204ENST00000549354 NKX2-6A6NCS4 301 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 ZFP92A6NM28 416 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 NUDT19A8MXV4 375 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 TM4SF5O14894 197 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 RSPO1Q2MKA7 263 aaPredicted RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 GFI1BQ5VTD9 330 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 SLC35G3Q8N808 338 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 OR10D3Q8NH80 312 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 CPNE4Q96A23 557 aaPredicted RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 RHOVQ96L33 236 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 SYT3Q9BQG1 590 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 AURKAIP1Q9NWT8 199 aaPredicted RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 B4GALT7Q9UBV7 327 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 CUL9Q8IWT3 2517 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 IGKV3D-15A0A087WSY6 115 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 IGKV1-12A0A0C4DH73 117 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 CRYM-AS1A6NIL9 109 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 SERPINE3A8MV23 424 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 HSPA12AO43301 675 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 NRASP01111 189 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 NGFP01138 241 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 SP1P08047 785 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 SCTP09683 121 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 CCL1P22362 96 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 AADACP22760 399 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 LHX2P50458 406 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 MRPS34P82930 218 aaKnown RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 NECAP1Q8NC96 275 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 OR10AD1Q8NGE0 317 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 TMEM45BQ96B21 275 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 TP53RKQ96S44 253 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 ATRXP46100 2492 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 E5RGE8 158 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 TAGLN2P37802 199 aaKnown RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF84P51523 738 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 TMEM267Q0VDI3 215 aaPredicted RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 FAM27BQ5VT28 67 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 FIP1L1Q6UN15 594 aaKnown RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 Q6ZSR3 168 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms