RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 HIST1H1DP16402 221 aaKnown RBP4.11□□□□□ -1.75
APP-217ENST00000548570 CCL3L1P16619 93 aa4.11□□□□□ -1.75
APP-217ENST00000548570 RCC1P18754 421 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 FUT3P21217 361 aa4.11□□□□□ -1.75
APP-217ENST00000548570 CPT2P23786 658 aa4.11□□□□□ -1.75
APP-217ENST00000548570 BLVRBP30043 206 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 TNFSF8P32971 234 aa4.11□□□□□ -1.75
APP-217ENST00000548570 P2RX3P56373 397 aa4.11□□□□□ -1.75
APP-217ENST00000548570 LCN2P80188 198 aa4.11□□□□□ -1.75
APP-217ENST00000548570 PRB3Q04118 309 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 AESQ08117 197 aa4.11□□□□□ -1.75
APP-217ENST00000548570 GPR176Q14439 515 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ATXN7L3Q14CW9 347 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 GRK1Q15835 563 aa4.11□□□□□ -1.75
APP-217ENST00000548570 CR1LQ2VPA4 569 aa4.11□□□□□ -1.75
APP-217ENST00000548570 CDNFQ49AH0 187 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ATAD3CQ5T2N8 411 aa4.11□□□□□ -1.75
APP-217ENST00000548570 TMEM200BQ69YZ2 307 aa4.11□□□□□ -1.75
APP-217ENST00000548570 HCP5Q6MZN7 132 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ZNF880Q6PDB4 577 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
APP-217ENST00000548570 C1orf122Q6ZSJ8 110 aa4.11□□□□□ -1.75
APP-217ENST00000548570 Q6ZTK2 550 aa4.11□□□□□ -1.75
APP-217ENST00000548570 BTN2A1Q7KYR7 527 aa4.11□□□□□ -1.75
APP-217ENST00000548570 REC114Q7Z4M0 266 aa4.11□□□□□ -1.75
APP-217ENST00000548570 PEG10Q86TG7 708 aaKnown RBP4.11□□□□□ -1.75
APP-217ENST00000548570 LINC00596Q86U02 117 aa4.11□□□□□ -1.75
APP-217ENST00000548570 CCDC190Q86UF4 302 aa4.11□□□□□ -1.75
APP-217ENST00000548570 MFSD4AQ8N468 514 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ASCC1Q8N9N2 400 aaKnown RBP4.11□□□□□ -1.75
APP-217ENST00000548570 CHST4Q8NCG5 386 aa4.11□□□□□ -1.75
APP-217ENST00000548570 TMEM185AQ8NFB2 350 aa4.11□□□□□ -1.75
APP-217ENST00000548570 C8orf46Q8TAG6 207 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ACOT12Q8WYK0 555 aa4.11□□□□□ -1.75
APP-217ENST00000548570 CORO2AQ92828 525 aa4.11□□□□□ -1.75
APP-217ENST00000548570 TNFRSF14Q92956 283 aa4.11□□□□□ -1.75
APP-217ENST00000548570 MED30Q96HR3 178 aa4.11□□□□□ -1.75
APP-217ENST00000548570 CMTM3Q96MX0 182 aa4.11□□□□□ -1.75
APP-217ENST00000548570 WDFY2Q96P53 400 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ABHD1Q96SE0 405 aa4.11□□□□□ -1.75
APP-217ENST00000548570 SDHCQ99643 169 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 SSBP3Q9BWW4 388 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 FAM234AQ9H0X4 552 aa4.11□□□□□ -1.75
APP-217ENST00000548570 SIRPDQ9H106 197 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ATG5Q9H1Y0 275 aa4.11□□□□□ -1.75
APP-217ENST00000548570 GSX1Q9H4S2 264 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 AUNIPQ9H7T9 357 aa4.11□□□□□ -1.75
APP-217ENST00000548570 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.11□□□□□ -1.75
APP-217ENST00000548570 BATF3Q9NR55 127 aa4.11□□□□□ -1.75
APP-217ENST00000548570 ING3Q9NXR8 418 aa4.11□□□□□ -1.75
APP-217ENST00000548570 SLC25A10Q9UBX3 287 aaPredicted RBP4.11□□□□□ -1.75
APP-217ENST00000548570 AK3Q9UIJ7 227 aa4.11□□□□□ -1.75
APP-217ENST00000548570 KIF25Q9UIL4 384 aa4.11□□□□□ -1.75
APP-217ENST00000548570 RPUSD1Q9UJJ7 312 aaKnown RBP4.11□□□□□ -1.75
APP-217ENST00000548570 HSF4Q9ULV5 492 aa4.11□□□□□ -1.75
APP-217ENST00000548570 EDARQ9UNE0 448 aa4.11□□□□□ -1.75
APP-217ENST00000548570 PEX16Q9Y5Y5 336 aa4.11□□□□□ -1.75
APP-217ENST00000548570 A3GALT2U3KPV4 340 aa4.11□□□□□ -1.75
APP-217ENST00000548570 PLCE1Q9P212 2302 aa4.11□□□□□ -1.75
APP-217ENST00000548570 SPG11Q96JI7 2443 aa4.11□□□□□ -1.75
APP-217ENST00000548570 USF3Q68DE3 2245 aa4.1□□□□□ -1.75
APP-217ENST00000548570 TRAV18A0A075B6X5 111 aa4.1□□□□□ -1.75
APP-217ENST00000548570 LOC105371242A0A075B767 164 aa4.1□□□□□ -1.75
APP-217ENST00000548570 PPIAL4CA0A0B4J2A2 164 aa4.1□□□□□ -1.75
APP-217ENST00000548570 IGHV2-70DA0A0C4DH43 119 aa4.1□□□□□ -1.75
APP-217ENST00000548570 A0A0G2JMP0 313 aa4.1□□□□□ -1.75
APP-217ENST00000548570 A0A0X1KG70 313 aa4.1□□□□□ -1.75
APP-217ENST00000548570 KIR2DS1A0A191URI9 304 aa4.1□□□□□ -1.75
APP-217ENST00000548570 ODAMA1E959 279 aa4.1□□□□□ -1.75
APP-217ENST00000548570 C17orf98A8MV24 154 aa4.1□□□□□ -1.75
APP-217ENST00000548570 C12orf77C9JDV5 145 aa4.1□□□□□ -1.75
APP-217ENST00000548570 NPIPB11E5RHQ5 1161 aa4.1□□□□□ -1.75
APP-217ENST00000548570 MGST3O14880 152 aa4.1□□□□□ -1.75
APP-217ENST00000548570 XRCC3O43542 346 aa4.1□□□□□ -1.75
APP-217ENST00000548570 NDUFB3O43676 98 aa4.1□□□□□ -1.75
APP-217ENST00000548570 LANCL1O43813 399 aa4.1□□□□□ -1.75
APP-217ENST00000548570 FBXO24O75426 580 aa4.1□□□□□ -1.75
APP-217ENST00000548570 FSHBP01225 129 aa4.1□□□□□ -1.75
APP-217ENST00000548570 GLAP06280 429 aa4.1□□□□□ -1.75
APP-217ENST00000548570 NDUFB7P17568 137 aa4.1□□□□□ -1.75
APP-217ENST00000548570 ERP29P30040 261 aaKnown RBP4.1□□□□□ -1.75
APP-217ENST00000548570 MNDAP41218 407 aa4.1□□□□□ -1.75
APP-217ENST00000548570 TAS2R20P59543 309 aa4.1□□□□□ -1.75
APP-217ENST00000548570 GNB2P62879 340 aa4.1□□□□□ -1.75
APP-217ENST00000548570 PAX8Q06710 450 aa4.1□□□□□ -1.75
APP-217ENST00000548570 EDDM3AQ14507 147 aa4.1□□□□□ -1.75
APP-217ENST00000548570 HERPUD1Q15011 391 aa4.1□□□□□ -1.75
APP-217ENST00000548570 KCNJ8Q15842 424 aa4.1□□□□□ -1.75
APP-217ENST00000548570 ZNF79Q15937 498 aa4.1□□□□□ -1.75
APP-217ENST00000548570 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
APP-217ENST00000548570 PAN3Q58A45 887 aaKnown RBP4.1□□□□□ -1.75
APP-217ENST00000548570 UBE2NLQ5JXB2 153 aa4.1□□□□□ -1.75
APP-217ENST00000548570 LDLRAD2Q5SZI1 272 aa4.1□□□□□ -1.75
APP-217ENST00000548570 HACD4Q5VWC8 232 aa4.1□□□□□ -1.75
APP-217ENST00000548570 SLC35E4Q6ICL7 350 aa4.1□□□□□ -1.75
APP-217ENST00000548570 CNIH2Q6PI25 160 aa4.1□□□□□ -1.75
APP-217ENST00000548570 SLC36A1Q7Z2H8 476 aa4.1□□□□□ -1.75
APP-217ENST00000548570 LDLRAD3Q86YD5 345 aa4.1□□□□□ -1.75
APP-217ENST00000548570 ARL6IP6Q8N6S5 226 aa4.1□□□□□ -1.75
APP-217ENST00000548570 GVQW1Q8N7I0 195 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms