RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 AMBNQ9NP70 447 aa16.12■□□□□ 0.17
SSH1-207ENST00000547862 TAS2R4Q9NYW5 299 aa16.12■□□□□ 0.17
SSH1-207ENST00000547862 ZNF581Q9P0T4 197 aa16.12■□□□□ 0.17
SSH1-207ENST00000547862 GMPPBQ9Y5P6 360 aa16.12■□□□□ 0.17
SSH1-207ENST00000547862 IGHV3-72A0A0B4J1Y9 119 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 MAGEB3O15480 346 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 HTR3BO95264 441 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 RAB3AP20336 220 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 THBS3P49746 956 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 RSBN1Q5VWQ0 802 aaPredicted RBP16.11■□□□□ 0.17
SSH1-207ENST00000547862 SLC35E3Q7Z769 313 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 CHPT1Q8WUD6 406 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 BARHL1Q9BZE3 327 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 GPR61Q9BZJ8 451 aa16.11■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A18PA6NE21 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A16PA6NEW6 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A20PA6NIJ5 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A9PA6NNJ1 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A12PA8MX19 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A5PA8MXJ8 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 HSD17B6O14756 317 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A15PP0C7V4 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A13PP0C7W8 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A14PP0C7W9 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 FAM90A24PP0C7X0 464 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 EGFEM1PQ0D2K5 195 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 IL13RA2Q14627 380 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 MOB3BQ86TA1 216 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 THNSL2Q86YJ6 484 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 SYS1Q8N2H4 156 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 PARP16Q8N5Y8 322 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 CPNE2Q96FN4 548 aaPredicted RBP16.1■□□□□ 0.17
SSH1-207ENST00000547862 ERVK13-1Q9NX77 482 aa16.1■□□□□ 0.17
SSH1-207ENST00000547862 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 ATP5HO75947 161 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 CDRT1O95170 752 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 CGB3P0DN86 165 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 CGB7P0DN87 165 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 RAB7AP51149 207 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 ALDH3A2P51648 485 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 GBX2P52951 348 aaPredicted RBP16.09■□□□□ 0.17
SSH1-207ENST00000547862 SLC25A30Q5SVS4 291 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 OR8H3Q8N146 312 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 CBR4Q8N4T8 237 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 PXT1Q8NFP0 134 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 HAVCR2Q8TDQ0 301 aa16.09■□□□□ 0.17
SSH1-207ENST00000547862 NBEAL2Q6ZNJ1 2754 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 RPSAP08865 295 aaKnown RBP16.08■□□□□ 0.16
SSH1-207ENST00000547862 GTF2A1P52655 376 aaPredicted RBP16.08■□□□□ 0.16
SSH1-207ENST00000547862 SLC35B1P78383 322 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 ELP2Q6IA86 826 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 FOXRED2Q8IWF2 684 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 SUMF2Q8NBJ7 301 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 NEK7Q8TDX7 302 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 RGP1Q92546 391 aaPredicted RBP16.08■□□□□ 0.16
SSH1-207ENST00000547862 MYCBPQ99417 103 aaPredicted RBP16.08■□□□□ 0.16
SSH1-207ENST00000547862 DPCDQ9BVM2 203 aaPredicted RBP16.08■□□□□ 0.16
SSH1-207ENST00000547862 FAM118AQ9NWS6 357 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 ING4Q9UNL4 249 aa16.08■□□□□ 0.16
SSH1-207ENST00000547862 IGHV3-43A0A0B4J1X8 118 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 NCBP2LA6PVI3 153 aaKnown RBP16.07■□□□□ 0.16
SSH1-207ENST00000547862 FGF16O43320 207 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 OR7C1O76099 320 aaPredicted RBP16.07■□□□□ 0.16
SSH1-207ENST00000547862 FADS2O95864 444 aaKnown RBP16.07■□□□□ 0.16
SSH1-207ENST00000547862 IGHV3-43DP0DP04 118 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 VSIG8P0DPA2 414 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 SERPINA2P20848 420 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 DEFB136Q30KP8 78 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 LCNL1Q6ZST4 164 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 STPG2Q8N412 459 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 OR52I1Q8NGK6 324 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 JAM3Q9BX67 310 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 ST3GAL6Q9Y274 331 aa16.07■□□□□ 0.16
SSH1-207ENST00000547862 NPIPB11E5RHQ5 1161 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 H3BNX3 289 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 CCRL2O00421 344 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 GABRB1P18505 474 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 DDI2Q5TDH0 399 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 FAM53AQ6NSI3 398 aaPredicted RBP16.06■□□□□ 0.16
SSH1-207ENST00000547862 CCDC107Q8WV48 283 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 TFAP2CQ92754 450 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 MCRIP2Q9BUT9 160 aaKnown RBP16.06■□□□□ 0.16
SSH1-207ENST00000547862 DNAH9Q9NYC9 4486 aa16.06■□□□□ 0.16
SSH1-207ENST00000547862 IGHV1-3A0A0C4DH29 117 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 TMEM30CPA0ZSE6 113 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 LINC01548A6NM66 108 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 SDCBPO00560 298 aaPredicted RBP16.05■□□□□ 0.16
SSH1-207ENST00000547862 IGHG2P01859 326 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 CSTBP04080 98 aaKnown RBP16.05■□□□□ 0.16
SSH1-207ENST00000547862 MYCNOSP40205 109 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 KCNJ3P48549 501 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 RBM11P57052 281 aaKnown RBP16.05■□□□□ 0.16
SSH1-207ENST00000547862 PPP3R1P63098 170 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 MRPL28Q13084 256 aaKnown RBP16.05■□□□□ 0.16
SSH1-207ENST00000547862 ATAD3CQ5T2N8 411 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 XAF1Q6GPH4 301 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 ZNF695Q8IW36 515 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 ARL11Q969Q4 196 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 ORAI1Q96D31 301 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 RBMXL1Q96E39 390 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms