RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 PLSCR3Q9NRY6 295 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 KIF25Q9UIL4 384 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 MEIKINA0A087WXM9 373 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 LOC107986453A0A1B0GWG9 222 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 DEGS1O15121 323 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 PRKYO43930 277 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 KDM4BO94953 1096 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 IL1AP01583 271 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 GAPDHP04406 335 aaKnown RBP9.87□□□□□ -0.83
SCAF11-208ENST00000546534 GSTP1P09211 210 aaKnown RBP9.87□□□□□ -0.83
SCAF11-208ENST00000546534 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 ATF1P18846 271 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 MS4A2Q01362 244 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 DHFR2Q86XF0 187 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 RDH10Q8IZV5 341 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF491Q8N8L2 437 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF565Q8N9K5 539 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 CCDC54Q8NEL0 328 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 C10orf35Q96D05 121 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 RBMXL1Q96E39 390 aaKnown RBP9.87□□□□□ -0.83
SCAF11-208ENST00000546534 UBE2E2Q96LR5 201 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 S1PR3Q99500 378 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 RASL11BQ9BPW5 248 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 KRT84Q9NSB2 600 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 ARL8BQ9NVJ2 186 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 TAGLN3Q9UI15 199 aa9.87□□□□□ -0.83
SCAF11-208ENST00000546534 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 M0R129 80 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 HSPB6O14558 160 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 IGF1P05019 195 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 KRT8P05787 483 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 RAP2AP10114 183 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 PRKACBP22694 351 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 C21orf33P30042 268 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-208ENST00000546534 HTR1FP30939 366 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 GABPB1Q06547 395 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-208ENST00000546534 CDK5R1Q15078 307 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 LHFPL2Q6ZUX7 228 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 UTS2BQ765I0 119 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 PRSS35Q8N3Z0 413 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 FAM71E2Q8N5Q1 922 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 OR51T1Q8NGJ9 327 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 OR5D18Q8NGL1 313 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 DLX4Q92988 240 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-208ENST00000546534 SPACA5Q96QH8 159 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 TBX5Q99593 518 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 VSIG4Q9Y279 399 aa9.86□□□□□ -0.83
SCAF11-208ENST00000546534 METTL15A6NJ78 407 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF736B4DX44 427 aaPredicted RBP9.85□□□□□ -0.83
SCAF11-208ENST00000546534 GNGT2O14610 69 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 MOSP00540 346 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 OR5H8P0DN80 308 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 PPIFP30405 207 aaKnown RBP9.85□□□□□ -0.83
SCAF11-208ENST00000546534 SOX6P35712 828 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 KIR3DL2P43630 455 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 ZP1P60852 638 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 TMEM65Q6PI78 240 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 SLC16A12Q6ZSM3 486 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 Q8N1Y9 231 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 TMEM104Q8NE00 496 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 OR6Q1Q8NGQ2 317 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 MRGPRDQ8TDS7 321 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 SPSB1Q96BD6 273 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 FGGYQ96C11 551 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 OPALINQ96PE5 141 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 NCOR1P1Q9H4R4 102 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 C19orf73Q9NVV2 129 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 NDE1Q9NXR1 346 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF580Q9UK33 172 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 WSB1Q9Y6I7 421 aa9.85□□□□□ -0.83
SCAF11-208ENST00000546534 TRAV39A0A0B4J263 110 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 A0A1W2PQL4 384 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-208ENST00000546534 MAGEA13PA6NCF6 341 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 H0YJX3 145 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 ANXA8P13928 327 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 CD1BP29016 333 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 SSTR5P35346 364 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 CRISP1P54107 249 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 SLURP1P55000 103 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 F2RL1P55085 397 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 ISL1P61371 349 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 TRIM25Q14258 630 aaKnown RBP9.84□□□□□ -0.83
SCAF11-208ENST00000546534 PAN3Q58A45 887 aaKnown RBP9.84□□□□□ -0.83
SCAF11-208ENST00000546534 AADACL4Q5VUY2 407 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 ACSM6Q6P461 480 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 OR10A7Q8NGE5 316 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 OR8H1Q8NGG4 311 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 ST6GALNAC6Q969X2 333 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 ALX4Q9H161 411 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-208ENST00000546534 RHOFQ9HBH0 211 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 NEK6Q9HC98 313 aa9.84□□□□□ -0.83
SCAF11-208ENST00000546534 H2AFY2Q9P0M6 372 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-208ENST00000546534 TRAV24A0A0B4J272 114 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 G3V318 75 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 UBCP0CG48 685 aaKnown RBP9.83□□□□□ -0.84
SCAF11-208ENST00000546534 ZNF20P17024 532 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 MYF6P23409 242 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 PTGES3Q15185 160 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms