RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HTTP42858 3142 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 UTRNP46939 3433 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 TRBV24-1A0A075B6N3 115 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 CCDC187A0A096LP49 1063 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 IGHV3-20A0A0C4DH32 117 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 OR5H15A6NDH6 313 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF814B7Z6K7 855 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 C9J4A7 227 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF587BE7ETH6 402 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 H3BQ15 152 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 HSD17B6O14756 317 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 PPIHO43447 177 aaKnown RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZIC3O60481 467 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 CLN5O75503 358 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 NAPSAO96009 420 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 LCATP04180 440 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 KLK3P07288 261 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 AADACP22760 399 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 MDH2P40926 338 aaKnown RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 FGF12P61328 243 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 HBG1P69891 147 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 HBG2P69892 147 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 HLA-DRB3P79483 266 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 CCL7P80098 99 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SRSF2Q01130 221 aaKnown RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF92Q03936 586 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 KIAA0141Q14154 515 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 RAET1LQ5VY80 246 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ABLIM2Q6H8Q1 611 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ADAM5Q6NVV9 412 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SPSB3Q6PJ21 355 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 TMEM182Q6ZP80 229 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 RNF144BQ7Z419 303 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF429Q86V71 674 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SELENOHQ8IZQ5 122 aaKnown RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 C1orf87Q8N0U7 546 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SLC25A45Q8N413 288 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 PRR18Q8N4B5 295 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 FAM24BQ8N5W8 94 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SLC35G3Q8N808 338 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZIC4Q8N9L1 334 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 HSD17B11Q8NBQ5 300 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 OR5D18Q8NGL1 313 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 FAM216AQ8WUB2 273 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 MAFIPQ8WZ33 124 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 FBXO17Q96EF6 278 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 IMMP1LQ96LU5 166 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 IP6K3Q96PC2 410 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 OR6C1Q96RD1 312 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 AGMATQ9BSE5 352 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 PHF7Q9BWX1 381 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SMIM3Q9BZL3 60 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF442Q9H7R0 627 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 Q9N2K0 584 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 WSB1Q9Y6I7 421 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 SLCO1B1Q9Y6L6 691 aa5.56□□□□□ -1.52
SNHG1-225ENST00000545920 CACNA1CQ13936 2221 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 ARID1BQ8NFD5 2236 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 IGKV1-27A0A075B6S5 117 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 IGKV3D-15A0A087WSY6 115 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 IGHV1-45A0A0A0MS14 117 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 LOC102723971A0A1B0GUV8 181 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 IGSF23A1L1A6 192 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RNF212BA8MTL3 300 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 LINC00587B1AMM8 73 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 E9PLN8 166 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CLDN34H7C241 214 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 GEMIN2O14893 280 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 PPP1R2P9O14990 202 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 DEGS1O15121 323 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CNOT4O95628 575 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 PTBP3O95758 552 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CYB5R3P00387 301 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 MBP02144 154 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 GLI4P10075 376 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 NQO2P16083 231 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 EN2P19622 333 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 SPINK2P20155 84 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 EPHA8P29322 1005 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 GNRHRP30968 328 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 HOXA6P31267 233 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RPS10P46783 165 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 DUSP3P51452 185 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 NOVA1P51513 510 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 MLF1P58340 268 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 FXYD4P59646 89 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 NKX6-1P78426 367 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 NHLH2Q02577 135 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CHAF1BQ13112 559 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 ICAM4Q14773 271 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 ATP6V1FQ16864 119 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 SNAI3Q3KNW1 292 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 PHLDA2Q53GA4 152 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 PLCXD3Q63HM9 321 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RBMS3Q6XE24 437 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 DBX2Q6ZNG2 339 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 AAED1Q7RTV5 226 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms