RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C17orf58Q2M2W7 97 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 FAM27D1Q5T7N8 215 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 RSBN1Q5VWQ0 802 aaPredicted RBP12.73□□□□□ -0.37
CCDC78-216ENST00000544996 SLC35E4Q6ICL7 350 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 LIAT1Q6ZQX7 453 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 LYPD6Q86Y78 171 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 OR13A1Q8NGR1 328 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 PLPPR1Q8TBJ4 325 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 CREB3L1Q96BA8 519 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 MGLLQ99685 303 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 SELENOIQ9C0D9 397 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 CST11Q9H112 138 aa12.73□□□□□ -0.37
CCDC78-216ENST00000544996 TMEM30CPA0ZSE6 113 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 MCRIP1C9JLW8 97 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 ARL6IP5O75915 188 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 UCHL1P09936 223 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 UBBP0CG47 229 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 MGMTP16455 207 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 CPEP16870 476 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 NFYBP25208 207 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 CD34P28906 385 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 MAP2K4P45985 399 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 PRRX1P54821 245 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 TBCEQ15813 527 aaPredicted RBP12.72□□□□□ -0.37
CCDC78-216ENST00000544996 Q6ZSV7 163 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 LRRTM1Q86UE6 522 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 BANF2Q9H503 90 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 C16orf95Q9H693 158 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 CALYQ9NYX4 217 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 ZNF581Q9P0T4 197 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 RNF114Q9Y508 228 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 HILPDAQ9Y5L2 63 aa12.72□□□□□ -0.37
CCDC78-216ENST00000544996 A0A087X0M5 115 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 A0A1B0GX30 115 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM172BPA6NC97 362 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A10PA6NDY2 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A18PA6NE21 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A16PA6NEW6 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A20PA6NIJ5 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A7PA6NKC0 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A22PA8MWA6 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A12PA8MX19 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A5PA8MXJ8 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A23PA8MXZ1 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 LEUTXA8MZ59 168 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.37
CCDC78-216ENST00000544996 TSPAN9O75954 239 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 IL1AP01583 271 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A15PP0C7V4 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A13PP0C7W8 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A14PP0C7W9 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM90A24PP0C7X0 464 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 CGB3P0DN86 165 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 CGB7P0DN87 165 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 GZMHP20718 246 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 GDNFP39905 211 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 CEACAM3P40198 252 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 DYNLT3P51808 116 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 ARHGDIBP52566 201 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 GP2P55259 537 aaKnown RBP12.71□□□□□ -0.37
CCDC78-216ENST00000544996 RPS25P62851 125 aaKnown RBP12.71□□□□□ -0.37
CCDC78-216ENST00000544996 LDLRAD2Q5SZI1 272 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 BRICD5Q6PL45 260 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 BAIAP2L2Q6UXY1 529 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 DTX3Q8N9I9 347 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 OR4P4Q8NGL7 312 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 WFDC12Q8WWY7 111 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 FAM46BQ96A09 425 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 KIRREL1Q96J84 757 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 LINC00574Q9H8X3 128 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 ZNF286AQ9HBT8 521 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 IDI2-AS1Q9NZ38 188 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 PITPNC1Q9UKF7 332 aa12.71□□□□□ -0.37
CCDC78-216ENST00000544996 TENM1Q9UKZ4 2725 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 F2RL2O00254 374 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 MRPS14O60783 128 aaKnown RBP12.7□□□□□ -0.38
CCDC78-216ENST00000544996 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 GABRA5P31644 462 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 RAB13P51153 203 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 TMEM104Q8NE00 496 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 OR10A7Q8NGE5 316 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 OR4C13Q8NGP0 309 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 OR9G1Q8NH87 305 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 RFESDQ8TAC1 157 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 NPFFR1Q9GZQ6 430 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 RCC2Q9P258 522 aaKnown RBP12.7□□□□□ -0.38
CCDC78-216ENST00000544996 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 PEX16Q9Y5Y5 336 aa12.7□□□□□ -0.38
CCDC78-216ENST00000544996 NPIPB11E5RHQ5 1161 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 AIPO00170 330 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 536.6 ms