RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 CACNG7P62955 275 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 FOXO1Q12778 655 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 FAHD2BQ6P2I3 314 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF793Q6ZN11 406 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 CHST1O43916 411 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 KBTBD11O94819 623 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 GALP22466 123 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 FMODQ06828 376 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 PTOV1Q86YD1 416 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 CCL4L1Q8NHW4 92 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 MZB1Q8WU39 189 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 C11orf68Q9H3H3 251 aaKnown RBP9.19□□□□□ -0.94
PCDH9-204ENST00000544246 MRGPRX1Q96LB2 322 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 EXOGQ9Y2C4 368 aaKnown RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 A0A0B4J2E0 115 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 A0A1B0GX12 115 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 PMELP40967 661 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 MRGPRGQ86SM5 289 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 STPG2Q8N412 459 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 OIT3Q8WWZ8 545 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 LRRC3BQ96PB8 259 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 TSPAN32Q96QS1 320 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 MMP25Q9NPA2 562 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF275Q9NSD4 429 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 MYH7BA7E2Y1 1941 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 DLL1O00548 723 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 SLC25A42Q86VD7 318 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 PARD6GQ9BYG4 376 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 TRBV23-1A0A0A0MS06 115 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 DNAL4O96015 105 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 CCL2P13500 99 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 MMP9P14780 707 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 OR2V2Q96R30 315 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 METTL26Q96S19 204 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 TNS1Q9HBL0 1735 aaKnown RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 ANKRD20A5PA0PJZ0 165 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 H3BQ15 152 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 PLPP2O43688 288 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 CDX1P47902 265 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 HINT1P49773 126 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-204ENST00000544246 TEPPQ6URK8 271 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 GHITMQ9H3K2 345 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 TBX21Q9UL17 535 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 HSF4Q9ULV5 492 aa9.18□□□□□ -0.94
PCDH9-204ENST00000544246 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 C9orf172C9J069 976 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 MPDU1O75352 247 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 SURF2Q15527 256 aaPredicted RBP9.17□□□□□ -0.94
PCDH9-204ENST00000544246 WDFY2Q96P53 400 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF665Q9H7R5 613 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 MIOXQ9UGB7 285 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 AKAP11Q9UKA4 1901 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 DAOP14920 347 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 CTF1Q16619 201 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 UBALD2Q8IYN6 164 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 PAXXQ9BUH6 204 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 INSIG2Q9Y5U4 225 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 LILRA5A6NI73 299 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 SKP2Q13309 424 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 TMEM78Q5T7P6 136 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 C12orf54Q6X4T0 127 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 OR10D3Q8NH80 312 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
PCDH9-204ENST00000544246 ASB5Q8WWX0 329 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 KCNAB3O43448 404 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 GFRA1P56159 465 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 DEGS2Q6QHC5 323 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 MRGPRX3Q96LB0 322 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 KLK8O60259 260 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 HOXA6P31267 233 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 TRA2AQ13595 282 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCDH9-204ENST00000544246 GUCA2BQ16661 112 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 NFAM1Q8NET5 270 aaPredicted RBP9.17□□□□□ -0.94
PCDH9-204ENST00000544246 NUDT16L1Q9BRJ7 211 aaKnown RBP9.17□□□□□ -0.94
PCDH9-204ENST00000544246 GLRX2Q9NS18 164 aa9.17□□□□□ -0.94
PCDH9-204ENST00000544246 FZD5Q13467 585 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 ANKRD37Q7Z713 158 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 RNF7Q9UBF6 113 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 OR51B2Q9Y5P1 312 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 NPBWR2P48146 333 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 EWSR1Q01844 656 aaKnown RBP eCLIP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF770Q6IQ21 691 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 HARBI1Q96MB7 349 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 TMEM204Q9BSN7 226 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 SRFP11831 508 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 GAPTQ8N292 157 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 CTXND1A0A1B0GTU2 59 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 FGF9P31371 208 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 EIF3IQ13347 325 aaKnown RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 TM4SF20Q53R12 229 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 MOGAT3Q86VF5 341 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms