RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SFTPA1Q8IWL2 248 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 LHFPL5Q8TAF8 219 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 ADAMTS17Q8TE56 1095 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 PTPMT1Q8WUK0 201 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CLCF1Q9UBD9 225 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 COL11A1P12107 1806 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 FITM1A5D6W6 292 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 K7ESF4 209 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 OR7C2O60412 319 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 IAPPP10997 89 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 GZMHP20718 246 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CSF2RBP32927 897 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 DHRS7BQ6IAN0 325 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 PDPNQ86YL7 162 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 RNF133Q8WVZ7 376 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 ADIPOR1Q96A54 375 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 MRPL32Q9BYC8 188 aaKnown RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 ST6GALNAC2Q9UJ37 374 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 NGFP01138 241 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CCR2P41597 374 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 PSG9Q00887 426 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 MICBQ29980 383 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 WDR31Q8NA23 367 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 OR2M7Q8NG81 312 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 OR4C3Q8NH37 302 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 TMEM230Q96A57 120 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 RBM14Q96PK6 669 aaKnown RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CHST5Q9GZS9 411 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 OR1A1Q9P1Q5 309 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 FBXL17Q9UF56 701 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 CXCL13O43927 109 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 USF1P22415 310 aaPredicted RBP6.87□□□□□ -1.31
VPS13D-211ENST00000543710 RAB9AP51151 201 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 UCP3P55916 312 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 IZUMO4Q1ZYL8 232 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 DCAF12L2Q5VW00 463 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 OR10A7Q8NGE5 316 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 TGIF2Q9GZN2 237 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 RNF167Q9H6Y7 350 aa6.87□□□□□ -1.31
VPS13D-211ENST00000543710 A0A1B0GW15 77 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 HBZP02008 142 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 CLDN18P56856 261 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 INSM1Q01101 510 aaPredicted RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SKP2Q13309 424 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 LCN15Q6UWW0 184 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 OR4X2Q8NGF9 303 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TM4SF19Q96DZ7 209 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TMEM208Q9BTX3 173 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 PKIBQ9C010 78 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 HSF4Q9ULV5 492 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 CCL27Q9Y4X3 112 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 A6NJY4 79 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 CYB5R3P00387 301 aaPredicted RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TGFAP01135 160 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SLC25A5P05141 298 aaKnown RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 BTF3P20290 206 aaKnown RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 GAMTQ14353 236 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 PCOLCEQ15113 449 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 CCDC144NLQ6NUI1 221 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 CORO6Q6QEF8 472 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SLC25A26Q70HW3 274 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TMEM130Q8N3G9 435 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 RNASE6Q93091 150 aaKnown RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 FAAP24Q9BTP7 215 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 NTMQ9P121 344 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 CLN8Q9UBY8 286 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TRAV30A0A087WSZ9 112 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 OR2M5A3KFT3 312 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 J3QT63 122 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 GNB1P62873 340 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 HYAL4Q2M3T9 481 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 HLA-DRB5Q30154 266 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 OR2T10Q8NGZ9 312 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 OR4A5Q8NH83 315 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 LSM10Q969L4 123 aaKnown RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 ARHGAP5-AS1Q96IT6 56 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 RSRP1Q9BUV0 290 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SH3BGRL3Q9H299 93 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 ZNF665Q9H7R5 613 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 MRM2Q9UI43 246 aaKnown RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 ZFP30Q9Y2G7 519 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SOX21Q9Y651 276 aaPredicted RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 PTP4A3O75365 173 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 OPN1LWP04000 364 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 OR5AL1P0C617 328 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 VDAC1P21796 283 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 EDDM3AQ14507 147 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 KCNMB1Q16558 191 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 NKG7Q16617 165 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TBC1D26Q86UD7 250 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 SPNS2Q8IVW8 549 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 FAM103A1Q9BTL3 118 aaKnown RBP6.86□□□□□ -1.31
VPS13D-211ENST00000543710 TNFRSF12AQ9NP84 129 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms