RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TCF21O43680 179 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 SULT1B1O43704 296 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 MPZL2O60487 215 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CYB5R3P00387 301 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CST4P01036 141 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 MRPL3P09001 348 aaKnown RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 WNT2P09544 360 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 PSKH1P11801 424 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 RPS2P15880 293 aaKnown RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CRHBPP24387 322 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 HTR1FP30939 366 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 NPY4RP50391 375 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 HCCSP53701 268 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 GNB2P62879 340 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 MAB21L1Q13394 359 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ZMYND11Q15326 602 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 OR8B8Q15620 311 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF404Q494X3 552 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 SPRNQ5BIV9 151 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 SPANXN2Q5MJ10 180 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 AADACL4Q5VUY2 407 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF322Q6U7Q0 402 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 BTNL3Q6UXE8 466 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 SLC35F2Q8IXU6 374 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 SLC7A5P1Q8MH63 180 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 STX19Q8N4C7 294 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CBR4Q8N4T8 237 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ARL6IP6Q8N6S5 226 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CCDC54Q8NEL0 328 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 OR8B3Q8NGG8 313 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 OR56B2PQ8NGI1 322 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 OR51G2Q8NGK0 314 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CCDC107Q8WV48 283 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CYGBQ8WWM9 190 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 PIGCQ92535 297 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 RPL3LQ92901 407 aaKnown RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 Q96MT0 163 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 OR8B4Q96RC9 309 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 OR8B2Q96RD0 313 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CITED2Q99967 270 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 RTL8AQ9BWD3 113 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 PAPOLGQ9BWT3 736 aaKnown RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 GABARAPL3Q9BY60 117 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 PBOV1Q9GZY1 135 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 MOB1AQ9H8S9 216 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ZC4H2Q9NQZ6 224 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 UFSP2Q9NUQ7 469 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 C1orf123Q9NWV4 160 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 CLN6Q9NWW5 311 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ERVK-18Q9QC07 812 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 RABL2AQ9UBK7 228 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-220ENST00000541963 LRP12Q9Y561 859 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 ACANP16112 2415 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 TANC2Q9HCD6 1990 aa4.44□□□□□ -1.7
CPSF7-220ENST00000541963 IGHV3-64DA0A0J9YX35 117 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF816-ZNF321PA0A0X1KG74 233 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 hCG_38984A0A1B0GV85 526 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 CCDC182A6NF36 153 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 OOEPA6NGQ2 149 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 METTL15A6NJ78 407 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF850A8MQ14 1090 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 CEACAM18A8MTB9 384 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 TRIM77I1YAP6 450 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 J3QRK9 145 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 LGALS8O00214 317 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 EI24O14681 340 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 SPRY1O43609 319 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 NOS1APO75052 506 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 PTBP3O95758 552 aaKnown RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 SERPINA3P01011 423 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 SNRNP70P08621 437 aaKnown RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 MUC1P15941 1255 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 TALDO1P37837 337 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 PMELP40967 661 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 CAPZA1P52907 286 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 NANOS2P60321 138 aaKnown RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 ACTC1P68032 377 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 ACTA1P68133 377 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 LCN2P80188 198 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 IFITM2Q01629 132 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 PRDX4Q13162 271 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 MPPED2Q15777 294 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 NEDD8Q15843 81 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 MICBQ29980 383 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 SLC25A30Q5SVS4 291 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 SYT6Q5T7P8 510 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 PRAMEF6Q5VXH4 476 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 IL17RELQ6ZVW7 336 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 FAM220AQ7Z4H9 259 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 TCTE3Q8IZS6 198 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 NKAIN3Q8N8D7 197 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 YIPF7Q8N8F6 280 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-220ENST00000541963 POC1AQ8NBT0 407 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 DEFB108BQ8NET1 73 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 Q8NFD4 153 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 OR1M1Q8NGA1 313 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 OR10H4Q8NGA5 316 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 OR8B12Q8NGG6 310 aa4.43□□□□□ -1.7
CPSF7-220ENST00000541963 OR5A2Q8NGI9 324 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms