RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 S100PBPQ96BU1 408 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 MEGF10Q96KG7 1140 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 SNX22Q96L94 193 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 C11orf1Q9H5F2 150 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 PTRH2Q9Y3E5 179 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 STRAPQ9Y3F4 350 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 MAP1BP46821 2468 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-207ENST00000540998 SVILO95425 2214 aa8.9□□□□□ -0.99
CDC42SE1-207ENST00000540998 A0A1B0GV90 55 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 CCL4P13236 92 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 LIFP15018 202 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 FUT3P21217 361 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 DTYMKP23919 212 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 HIST1H3AP68431 136 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 HIST2H3PS2Q5TEC6 136 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 BEND4Q6ZU67 534 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 RABEPKQ7Z6M1 372 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 CMTM1Q8IZ96 169 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF610Q8N9Z0 462 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 IL1F10Q8WWZ1 152 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 SPSB1Q96BD6 273 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 SIGLEC12Q96PQ1 595 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 WNT5BQ9H1J7 359 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 PLA2G3Q9NZ20 509 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 KIAA1549Q9HCM3 1950 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 HS3ST1O14792 307 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 LILRA1O75019 489 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 TRAPPC6AO75865 159 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 PGA5P0DJD9 388 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 HAAOP46952 286 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 FAM27BQ5VT28 67 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR2T2Q6IF00 324 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 FAM53AQ6NSI3 398 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 Q6ZRM9 215 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 DPPA2Q7Z7J5 298 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF100Q8IYN0 542 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 SYT3Q9BQG1 590 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 SLC22A20A6NK97 555 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 SLC34A2O95436 690 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 UMODP07911 640 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 TRGC1P0CF51 173 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 BMP5P22003 454 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 S100A2P29034 98 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 ECI1P42126 302 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 CDX1P47902 265 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 RAB5CP51148 216 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 ELLP55199 621 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 PAX9P55771 341 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 CNN3Q15417 329 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 WIPI1Q5MNZ9 446 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 AKR1C8PQ5T2L2 129 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 SLC25A24Q6NUK1 477 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 DMRTC2Q8IXT2 367 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR56B2PQ8NGI1 322 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 RDH5Q92781 318 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 ANGPTL4Q9BY76 406 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 PRDM13Q9H4Q3 707 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 GAR1Q9NY12 217 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 TAAR3PQ9P1P4 343 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 TMED3Q9Y3Q3 217 aa8.89□□□□□ -0.99
CDC42SE1-207ENST00000540998 hCG_38984A0A1B0GV85 526 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 MRPS34P82930 218 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 SRYQ05066 204 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 ARL16Q0P5N6 197 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 RAB35Q15286 201 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 PRSS8Q16651 343 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 COMMD1Q8N668 190 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 CLDND2Q8NHS1 167 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 MALSU1Q96EH3 234 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 WFIKKN1Q96NZ8 548 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 LYRM2Q9NU23 88 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 TMEM38BQ9NVV0 291 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 SEMA5BQ9P283 1151 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 LY6G6EA0A0G2JKS1 128 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF503-AS2A6NEH8 195 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 SYNGR1O43759 233 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 PITX3O75364 302 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 METTL15P1P0C7V9 234 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF16P17020 682 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 PMELP40967 661 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 IL22RA1Q8N6P7 574 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 INTS12Q96CB8 462 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 NIPSNAP3BQ9BS92 247 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 PLEKHF2Q9H8W4 249 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 RPRMQ9NS64 109 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 U3KQA8 63 aa8.88□□□□□ -0.99
CDC42SE1-207ENST00000540998 TP53I11O14683 189 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 CA11O75493 328 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 TUBG1P23258 451 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF266Q14584 549 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 ARL6IP1Q15041 203 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF726P1Q15940 193 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 AAED1Q7RTV5 226 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 FOXB1Q99853 325 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR2H1Q9GZK4 316 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms