RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 DUX4L9Q6RFH8 374 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 METAP1DQ6UB28 335 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 MOB1BQ7L9L4 216 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 TRAPPC6BQ86SZ2 158 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 LGALS14Q8TCE9 139 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 C15orf40Q8WUR7 153 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 WDFY2Q96P53 400 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 ABCG5Q9H222 651 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 HEXA-AS1Q9H8Q6 139 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 MMP26Q9NRE1 261 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 CCDC59Q9P031 241 aaKnown RBP14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 ONECUT1Q9UBC0 465 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 RABL2AQ9UBK7 228 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4Q9UBX2 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 ADAM30Q9UKF2 790 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 RABL2BQ9UNT1 228 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 MEIKINA0A087WXM9 373 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 H3BMQ9 156 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 TPPPO94811 219 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 SNRPBP14678 240 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 ERVFRD-1P60508 538 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 AESQ08117 197 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 ATXN7L3Q14CW9 347 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 NKAPLQ5M9Q1 402 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 RSBN1Q5VWQ0 802 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 ZNF497Q6ZNH5 498 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 GAPTQ8N292 157 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 UPRTQ96BW1 309 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 BEX2Q9BXY8 128 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 BATF3Q9NR55 127 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 KCNIP1Q9NZI2 227 aa14.44□□□□□ -0.1
CLSTN3-210ENST00000540931 SMIM30A4D0T7 59 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 ORC5O43913 435 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 APOA1P02647 267 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 TFF1P04155 84 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 GSTP1P09211 210 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 PRTN3P24158 256 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 ARF6P62330 175 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 SIGIRRQ6IA17 410 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 BPIFB2Q8N4F0 458 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 OR4M1Q8NGD0 313 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 NDNFQ8TB73 568 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 TMPRSS13Q9BYE2 586 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 C19orf12Q9NSK7 152 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 TRAPPC2LQ9UL33 140 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 HIVEP2P31629 2446 aa14.43□□□□□ -0.1
CLSTN3-210ENST00000540931 ATRQ13535 2644 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 TRBV6-6A0A0A6YYG2 114 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 C17orf98A8MV24 154 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 RAB27BO00194 218 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 HSPB6O14558 160 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 FCN3O75636 299 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 MT-ND4P03905 459 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 TGFBR1P36897 503 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 GLIPR1P48060 266 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 PNLIPRP3Q17RR3 467 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 CHRFAM7AQ494W8 412 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 FAM120AOSQ5T036 256 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 GPR157Q5UAW9 335 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 HEPN1Q6WQI6 88 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 COQ2Q96H96 371 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 NICN1Q9BSH3 213 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 SIRPDQ9H106 197 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 LINC00574Q9H8X3 128 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 C12orf4Q9NQ89 552 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 KIF25Q9UIL4 384 aa14.42□□□□□ -0.1
CLSTN3-210ENST00000540931 KBTBD11-OT1A0A1B0GTJ5 212 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 FOXI3A8MTJ6 420 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 SOCS1O15524 211 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 SPINT2O43291 252 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 PAHP00439 452 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 CD3GP09693 182 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 HIST1H1DP16402 221 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 SRP14P37108 136 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 TALDO1P37837 337 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 SRSF7Q16629 238 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 C6orf201Q7Z4U5 140 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 SAMD12Q8N8I0 201 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 OR13D1Q8NGV5 346 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 DYNC2LI1Q8TCX1 351 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 CMSS1Q9BQ75 279 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 PECRQ9BY49 303 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 RBM38Q9H0Z9 239 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 CHMP1AQ9HD42 196 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 A3GALT2U3KPV4 340 aa14.41□□□□□ -0.1
CLSTN3-210ENST00000540931 STAB1Q9NY15 2570 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 A0A075B6Q4 140 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 UBE2QL1A1L167 161 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 XRCC3O43542 346 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 CLPXO76031 633 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 MMP9P14780 707 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 FPR2P25090 351 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 MNDAP41218 407 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 GLP1RP43220 463 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 TMEM50BP56557 158 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 SPCS2Q15005 226 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 Q3ZCU0 254 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 RTN4RL2Q86UN3 420 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 OR52M1Q8NGK5 317 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms