RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 SLC22A6Q4U2R8 563 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 FAM27D1Q5T7N8 215 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 SLC35E4Q6ICL7 350 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 GLIPR1L1Q6UWM5 242 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 PRSS48Q7RTY5 328 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 GAPTQ8N292 157 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 ABHD12Q8N2K0 398 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 JAGN1Q8N5M9 183 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 NKAIN3Q8N8D7 197 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 PHYHIPQ92561 330 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 MRPS24Q96EL2 167 aaKnown RBP11.44□□□□□ -0.58
USP28-209ENST00000540925 UQCC2Q9BRT2 126 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 BARHL1Q9BZE3 327 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 ZNF286AQ9HBT8 521 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 ISYNA1Q9NPH2 558 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 FBLN5Q9UBX5 448 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 MRPS28Q9Y2Q9 187 aaKnown RBP11.44□□□□□ -0.58
USP28-209ENST00000540925 RNF114Q9Y508 228 aa11.44□□□□□ -0.58
USP28-209ENST00000540925 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 LY6LH3BQJ8 138 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 IL1AP01583 271 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 UCHL1P09936 223 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 JUNBP17275 347 aaPredicted RBP11.43□□□□□ -0.58
USP28-209ENST00000540925 RAB13P51153 203 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 DYNC1I2Q13409 638 aaKnown RBP11.43□□□□□ -0.58
USP28-209ENST00000540925 GPR176Q14439 515 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 MED22Q15528 200 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 TMEM91Q6ZNR0 172 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 TMEM104Q8NE00 496 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 S100A13Q99584 98 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 TMED9Q9BVK6 235 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 RANBP3Q9H6Z4 567 aaPredicted RBP11.43□□□□□ -0.58
USP28-209ENST00000540925 PCDHB16Q9NRJ7 776 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 ING3Q9NXR8 418 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 CALYQ9NYX4 217 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 RAB26Q9ULW5 256 aa11.43□□□□□ -0.58
USP28-209ENST00000540925 FAM90A10PA6NDY2 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A18PA6NE21 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A16PA6NEW6 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A20PA6NIJ5 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A7PA6NKC0 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A12PA8MX19 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A5PA8MXJ8 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A23PA8MXZ1 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A15PP0C7V4 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A13PP0C7W8 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A14PP0C7W9 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM90A24PP0C7X0 464 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 HTR1DP28221 377 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 GLP1RP43220 463 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 KIR2DS4P43632 304 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 EFNB2P52799 333 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 MLLT11Q13015 90 aaPredicted RBP11.42□□□□□ -0.58
USP28-209ENST00000540925 HLA-DRB5Q30154 266 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 RBM48Q5RL73 367 aaKnown RBP11.42□□□□□ -0.58
USP28-209ENST00000540925 C1orf100Q5SVJ3 147 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 LIPKQ5VXJ0 399 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 AWAT2Q6E213 333 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 SIGIRRQ6IA17 410 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 ZNF497Q6ZNH5 498 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 Q8N2B8 174 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 ZNF565Q8N9K5 539 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 Q96M66 194 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 RAB18Q9NP72 206 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 DPM3Q9P2X0 92 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 HILPDAQ9Y5L2 63 aa11.42□□□□□ -0.58
USP28-209ENST00000540925 FAM172BPA6NC97 362 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 C15orf65H3BRN8 121 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 MGMTP16455 207 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 CPEP16870 476 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 SSTR5P35346 364 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 TBCEQ15813 527 aaPredicted RBP11.41□□□□□ -0.58
USP28-209ENST00000540925 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 PLA1AQ53H76 456 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 MRGPRDQ8TDS7 321 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 UFD1Q92890 307 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 CYYR1Q96J86 154 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 CNBD2Q96M20 576 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 GFI1Q99684 422 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 SPACA1Q9HBV2 294 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 IDI2-AS1Q9NZ38 188 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 GHRLQ9UBU3 117 aa11.41□□□□□ -0.58
USP28-209ENST00000540925 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 TMEM30CPA0ZSE6 113 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 MT-ND4P03905 459 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 SRMP19623 302 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 VHLP40337 213 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 MAP2K4P45985 399 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.58
USP28-209ENST00000540925 QRFPP83859 136 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 FBLN7Q53RD9 439 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 SLC16A12Q6ZSM3 486 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 CEACAM19Q7Z692 300 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 OR9G1Q8NH87 305 aa11.4□□□□□ -0.58
USP28-209ENST00000540925 NDNFQ8TB73 568 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms