RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 AK6Q9Y3D8 172 aaKnown RBP7.5□□□□□ -1.21
SNHG1-215ENST00000540904 PEX16Q9Y5Y5 336 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 POMT1Q9Y6A1 747 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 TRAV39A0A0B4J263 110 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 KBTBD11-OT1A0A1B0GTJ5 212 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM30CPA0ZSE6 113 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 ODF3BA8MYP8 253 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 CCRL2O00421 344 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 SLC22A1O15245 554 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 GPR137BO60478 399 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 VSIG8P0DPA2 414 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 HKR1P10072 659 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 NFYBP25208 207 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 GDNFP39905 211 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 PAX5Q02548 391 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 P2RY14Q15391 338 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 SSX2Q16385 188 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 LTC4SQ16873 150 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 C17orf58Q2M2W7 97 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 PLA1AQ53H76 456 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 SLC35E4Q6ICL7 350 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 OR52W1Q6IF63 320 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 RAB12Q6IQ22 244 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 ABHD12Q8N2K0 398 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 OR6M1Q8NGM8 313 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 NDNFQ8TB73 568 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 CCDC107Q8WV48 283 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 DYRK2Q92630 601 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 Q96M66 194 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 GFI1Q99684 422 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 SSX3Q99909 188 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 CLEC7AQ9BXN2 247 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM59Q9BXS4 323 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 KCNK15Q9H427 330 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 NCOR1P1Q9H4R4 102 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 CALYQ9NYX4 217 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 RCC2Q9P258 522 aaKnown RBP7.49□□□□□ -1.21
SNHG1-215ENST00000540904 HILPDAQ9Y5L2 63 aa7.49□□□□□ -1.21
SNHG1-215ENST00000540904 TRDV1A0A1B0GX56 115 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 UBE2QL1A1L167 161 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A10PA6NDY2 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A18PA6NE21 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A16PA6NEW6 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A20PA6NIJ5 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A8PA6NJQ4 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A7PA6NKC0 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A22PA8MWA6 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A12PA8MX19 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A5PA8MXJ8 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A23PA8MXZ1 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 H3BUX3 64 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 AIPO00170 330 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 SLC17A2O00624 439 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 BPNT1O95861 308 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 IGHV3-7P01780 117 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 MT-ND4P03905 459 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A15PP0C7V4 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A13PP0C7W8 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A14PP0C7W9 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FAM90A24PP0C7X0 464 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 CGB3P0DN86 165 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 CGB7P0DN87 165 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 ARSBP15848 533 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FUT3P21217 361 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 GALP22466 123 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 MYL9P24844 172 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 SSTR5P35346 364 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 COMPP49747 757 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-215ENST00000540904 CLDN12P56749 244 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 FOXL1Q12952 345 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 RBM39Q14498 530 aaKnown RBP7.48□□□□□ -1.21
SNHG1-215ENST00000540904 NEDD8Q15843 81 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 RAB11BQ15907 218 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 LRRC75BQ2VPJ9 315 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 KCTD21Q4G0X4 260 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 AWAT1Q58HT5 328 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 NKAPLQ5M9Q1 402 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 LDLRAD2Q5SZI1 272 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 SIGIRRQ6IA17 410 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 C22orf42Q6IC83 251 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 CD200R1LQ6Q8B3 271 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF497Q6ZNH5 498 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 DYNAPQ8N1N2 210 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 OR5R1Q8NH85 324 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 RFESDQ8TAC1 157 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 KCNG3Q8TAE7 436 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 LEAP2Q969E1 77 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 MALSU1Q96EH3 234 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 KIRREL1Q96J84 757 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 NEDD4LQ96PU5 975 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 MEGF9Q9H1U4 602 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 ETAA1Q9NY74 926 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 VPREB3Q9UKI3 123 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 TRAPPC2LQ9UL33 140 aa7.48□□□□□ -1.21
SNHG1-215ENST00000540904 TBL2Q9Y4P3 447 aaKnown RBP7.48□□□□□ -1.21
SNHG1-215ENST00000540904 TRAV1-2A0A0B4J238 106 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 SHISA3A0PJX4 238 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM14DPA8MWL7 114 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 H3BUI4 141 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 TOR1AO14656 332 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms