RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 C5orf24Q7Z6I8 188 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 OR2Y1Q8NGV0 311 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 ADGRG7Q96K78 797 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 LIPGQ9Y5X9 500 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 TNRC6BQ9UPQ9 1833 aaKnown RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 A0A0G2JMM0 328 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 A0A1W2PPB8 328 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 A0A1W2PRS3 328 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 KIR3DP1A8MWS1 328 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 PATE3B3GLJ2 98 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 TUSC2O75896 110 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 SCAF4O95104 1147 aaKnown RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 IGHV2-70P01814 119 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 BCL3P20749 454 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 UBE2KP61086 200 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 ZNF506Q5JVG8 444 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 NCMAPQ5T1S8 102 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 DPPA3Q6W0C5 159 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 COLCA1Q6ZS62 124 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 ZNF429Q86V71 674 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 CPEB3Q8NE35 698 aaKnown RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 OR10D3Q8NH80 312 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 OR2V1Q8NHB1 315 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 MAFAQ8NHW3 353 aaPredicted RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 TRAV20A0A0B4J274 112 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 IGKV1D-13A0A0B4J2D9 117 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CHST1O43916 411 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 P04436 131 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 IGKV1-13P0DP09 117 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 EPHA1P21709 976 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 KIAA0141Q14154 515 aaPredicted RBP10.54□□□□□ -0.72
NPC1-202ENST00000540608 ACER2Q5QJU3 275 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 IL22RA2Q969J5 263 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CPNE4Q96A23 557 aaPredicted RBP10.54□□□□□ -0.72
NPC1-202ENST00000540608 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
NPC1-202ENST00000540608 TOLLIPQ9H0E2 274 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CXorf65A6NEN9 183 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CTXN2P0C2S0 81 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 RAB2AP61019 212 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 FGF12P61328 243 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 DLK1P80370 383 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 TLE4Q04727 773 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 IL24Q13007 206 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 HERPUD1Q15011 391 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 ELOBQ15370 118 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 AKR1C8PQ5T2L2 129 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 TMEM217Q8N7C4 229 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 OR5D13Q8NGL4 314 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CLDND2Q8NHS1 167 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 GPHA2Q96T91 129 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CCL28Q9NRJ3 127 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 RNF115Q9Y4L5 304 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 KIR2DS1A0A191URI9 304 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 H0YL77 283 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 HBE1P02100 147 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 RFPL3SP0C7P2 107 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 KIR2DS4P43632 304 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CDX1P47902 265 aaPredicted RBP10.54□□□□□ -0.72
NPC1-202ENST00000540608 PAX9P55771 341 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 KIR2DS1Q14954 304 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 EDARADDQ8WWZ3 215 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 TVP23CQ96ET8 276 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 ATP5SQ99766 215 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
NPC1-202ENST00000540608 MMP24Q9Y5R2 645 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 WSB1Q9Y6I7 421 aa10.54□□□□□ -0.72
NPC1-202ENST00000540608 H0Y980 276 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 NTN3O00634 580 aaPredicted RBP10.53□□□□□ -0.72
NPC1-202ENST00000540608 CYTIPO60759 359 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 CEBPGP53567 150 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 TAS2R30P59541 319 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 RUNX1Q01196 453 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 WRBO00258 174 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 PGLYRP1O75594 196 aaPredicted RBP10.53□□□□□ -0.72
NPC1-202ENST00000540608 YIF1AO95070 293 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 FBP1P09467 338 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 HAAOP46952 286 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 ZFP36L1Q07352 338 aaKnown RBP10.53□□□□□ -0.72
NPC1-202ENST00000540608 ZNF154Q13106 437 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 PRDX4Q13162 271 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 OR8G1Q15617 311 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 MPV17LQ2QL34 196 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 KHDC3LQ587J8 217 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 SLC35E3Q7Z769 313 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 OR56B2PQ8NGI1 322 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 Q8WTZ3 238 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 NIPSNAP3BQ9BS92 247 aa10.53□□□□□ -0.72
NPC1-202ENST00000540608 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
NPC1-202ENST00000540608 IGKV1-6A0A0C4DH72 117 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 CXCL1P09341 107 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms